RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 HERC5Q9UII4 1024 aaKnown RBP11.15□□□□□ -0.62
UBBP4-201ENST00000583708 SLC4A4Q9Y6R1 1079 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 MAST2Q6P0Q8 1798 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 MYH2Q9UKX2 1941 aa11.15□□□□□ -0.62
UBBP4-201ENST00000583708 CCDC171Q6TFL3 1326 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 SGSM2O43147 1006 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 PPP1R12BO60237 982 aaPredicted RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 PCP11498 1178 aaKnown RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 DYNLL1P63167 89 aaKnown RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 CWC27Q6UX04 472 aaKnown RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 USP48Q86UV5 1035 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 LCORLQ8N3X6 602 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 TGFBRAP1Q8WUH2 860 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 OSBPL5Q9H0X9 879 aaPredicted RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 EHD4Q9H223 541 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
UBBP4-201ENST00000583708 ARPP21Q9UBL0 812 aaPredicted RBP11.14□□□□□ -0.63
UBBP4-201ENST00000583708 A0A0D9SFI3 127 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 GSG1L2A8MUP6 293 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 REC8O95072 547 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 SLC3A2P08195 630 aaKnown RBP11.13□□□□□ -0.63
UBBP4-201ENST00000583708 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 ESYT1Q9BSJ8 1104 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 DCP1AQ9NPI6 582 aaPredicted RBP11.13□□□□□ -0.63
UBBP4-201ENST00000583708 SWAP70Q9UH65 585 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 PCDHAC2Q9Y5I4 1007 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
UBBP4-201ENST00000583708 FLT1P17948 1338 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 M0R2C6 588 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 APPP05067 770 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 POLR3DP05423 398 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 NFIAQ12857 509 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 MAP3K11Q16584 847 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 C12orf60Q5U649 245 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 MAP1SQ66K74 1059 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 ARMC9Q7Z3E5 817 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 ZSCAN29Q8IWY8 852 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 C2orf69Q8N8R5 385 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 TEPSINQ96N21 525 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 GLIS2Q9BZE0 524 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 MCM9Q9NXL9 1143 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 ANAPC4Q9UJX5 808 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 U3KPZ7 1027 aaPredicted RBP11.12□□□□□ -0.63
UBBP4-201ENST00000583708 CNTNAP1P78357 1384 aa11.12□□□□□ -0.63
UBBP4-201ENST00000583708 PASKQ96RG2 1323 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 MYH7P12883 1935 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 POTEIP0CG38 1075 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 POTEJP0CG39 1038 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 HHIPL1Q96JK4 782 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 CCDC17Q96LX7 622 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 CSRNP1Q96S65 589 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
UBBP4-201ENST00000583708 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 NAPBQ9H115 298 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 DDX4Q9NQI0 724 aaKnown RBP11.11□□□□□ -0.63
UBBP4-201ENST00000583708 SERPINB13Q9UIV8 391 aa11.11□□□□□ -0.63
UBBP4-201ENST00000583708 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
UBBP4-201ENST00000583708 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 USP17L12C9JPN9 530 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 USP17L21D6R901 530 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 FGAP02671 866 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 IREB2P48200 963 aaKnown RBP11.1□□□□□ -0.63
UBBP4-201ENST00000583708 TDO2P48775 406 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 TCP10Q12799 353 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 PICALMQ13492 652 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 PPP4R3BQ5MIZ7 849 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 TRIM34Q9BYJ4 488 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 TMEM39BQ9GZU3 492 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 RNF41Q9H4P4 317 aaPredicted RBP11.1□□□□□ -0.63
UBBP4-201ENST00000583708 ZNF112Q9UJU3 913 aa11.1□□□□□ -0.63
UBBP4-201ENST00000583708 ZNF213O14771 459 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 PRKAB2O43741 272 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 CACNB3P54284 484 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 PDE4BQ07343 736 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 IMMTQ16891 758 aaKnown RBP11.09□□□□□ -0.63
UBBP4-201ENST00000583708 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 NBPF12Q5TAG4 269 aaPredicted RBP11.09□□□□□ -0.63
UBBP4-201ENST00000583708 RNF20Q5VTR2 975 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 CTR9Q6PD62 1173 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 ZNF589Q86UQ0 364 aaPredicted RBP11.09□□□□□ -0.63
UBBP4-201ENST00000583708 CRACR2BQ8N4Y2 399 aaPredicted RBP11.09□□□□□ -0.63
UBBP4-201ENST00000583708 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
UBBP4-201ENST00000583708 GBA2Q9HCG7 927 aaPredicted RBP11.09□□□□□ -0.63
UBBP4-201ENST00000583708 MYO5AQ9Y4I1 1855 aaKnown RBP11.08□□□□□ -0.64
UBBP4-201ENST00000583708 DDTLA6NHG4 134 aaPredicted RBP11.08□□□□□ -0.64
UBBP4-201ENST00000583708 TMEM88BA6NKF7 163 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 ADM5C9JUS6 153 aa11.08□□□□□ -0.64
UBBP4-201ENST00000583708 CTNND1O60716 968 aaKnown RBP11.08□□□□□ -0.64
UBBP4-201ENST00000583708 CELF2O95319 508 aaKnown RBP11.08□□□□□ -0.64
UBBP4-201ENST00000583708 CHGBP05060 677 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms