RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 SPTLC2O15270 562 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 SART3Q15020 963 aaKnown RBP15.87■□□□□ 0.13
SRSF1-205ENST00000582730 RBM43Q6ZSC3 357 aaKnown RBP15.87■□□□□ 0.13
SRSF1-205ENST00000582730 BRAPQ7Z569 592 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 LINC00301Q8NCQ3 95 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 NUP133Q8WUM0 1156 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 MINPP1Q9UNW1 487 aa15.87■□□□□ 0.13
SRSF1-205ENST00000582730 MARCKSP29966 332 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-205ENST00000582730 KRT40Q6A162 431 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 KLHL34Q8N239 644 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 GOLGA6L19H0YKK7 550 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 SNW1Q13573 536 aaKnown RBP15.86■□□□□ 0.13
SRSF1-205ENST00000582730 WTAPQ15007 396 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 NLRP3Q96P20 1036 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
SRSF1-205ENST00000582730 JAG2Q9Y219 1238 aa15.86■□□□□ 0.13
SRSF1-205ENST00000582730 CTAGE5O15320 804 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 CHAF1AQ13111 956 aaPredicted RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 SF3B3Q15393 1217 aaKnown RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 CMTR1Q8N1G2 835 aaKnown RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 KCNG4Q8TDN1 519 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 CCNL1Q9UK58 526 aaPredicted RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 ARAP2Q8WZ64 1704 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 TAF1P21675 1872 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 A0A0U1RQG5 324 aaPredicted RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 KLRK1P26718 216 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 VPS72Q15906 364 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 PPP4R3BQ5MIZ7 849 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 UBAC1Q9BSL1 405 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 SPTLC3Q9NUV7 552 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 NDUFA8P51970 172 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 DYNLL1P63167 89 aaKnown RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 PPARAQ07869 468 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 ZRSR1Q15695 479 aaKnown RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 ANO1Q5XXA6 986 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 ADALQ6DHV7 355 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 C11orf57Q6ZUT1 292 aaPredicted RBP15.85■□□□□ 0.13
SRSF1-205ENST00000582730 BCL2L12Q9HB09 334 aa15.85■□□□□ 0.13
SRSF1-205ENST00000582730 BECN2A8MW95 431 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 GOLGA6L6A8MZA4 724 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 SMIM22K7EJ46 135 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 RANBP6O60518 1105 aaKnown RBP15.84■□□□□ 0.13
SRSF1-205ENST00000582730 SSRP1Q08945 709 aaKnown RBP15.84■□□□□ 0.13
SRSF1-205ENST00000582730 POLR3EQ9NVU0 708 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 USP21Q9UK80 565 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 STX1AQ16623 288 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 SGMS1Q86VZ5 419 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 MYH15Q9Y2K3 1946 aa15.84■□□□□ 0.13
SRSF1-205ENST00000582730 CYP2D7A0A087X1C5 515 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 YEATS4O95619 227 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 LIFRP42702 1097 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.13
SRSF1-205ENST00000582730 RTN1Q16799 776 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 ENGASEQ8NFI3 743 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 STAG1Q8WVM7 1258 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 RNF41Q9H4P4 317 aaPredicted RBP15.83■□□□□ 0.13
SRSF1-205ENST00000582730 NARFQ9UHQ1 456 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.13
SRSF1-205ENST00000582730 CNTNAP4Q9C0A0 1308 aa15.83■□□□□ 0.13
SRSF1-205ENST00000582730 FAM84BQ96KN1 310 aaPredicted RBP15.83■□□□□ 0.12
SRSF1-205ENST00000582730 NYXQ9GZU5 481 aa15.83■□□□□ 0.12
SRSF1-205ENST00000582730 PRDM1O75626 825 aa15.83■□□□□ 0.12
SRSF1-205ENST00000582730 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
SRSF1-205ENST00000582730 ZNF804BA4D1E1 1349 aa15.83■□□□□ 0.12
SRSF1-205ENST00000582730 RPS6KA4O75676 772 aa15.82■□□□□ 0.12
SRSF1-205ENST00000582730 TRIM22Q8IYM9 498 aa15.82■□□□□ 0.12
SRSF1-205ENST00000582730 RREB1Q92766 1687 aa15.82■□□□□ 0.12
SRSF1-205ENST00000582730 NTRK3Q16288 839 aa15.82■□□□□ 0.12
SRSF1-205ENST00000582730 FMR1NBQ8N0W7 255 aaPredicted RBP15.82■□□□□ 0.12
SRSF1-205ENST00000582730 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
SRSF1-205ENST00000582730 COL1A1P02452 1464 aaPredicted RBP15.81■□□□□ 0.12
SRSF1-205ENST00000582730 PTGS1P23219 599 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 TPTE2Q6XPS3 522 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 TDRD7Q8NHU6 1098 aaKnown RBP15.81■□□□□ 0.12
SRSF1-205ENST00000582730 A0A1W2PQ27 194 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 A0A1W2PQ64 194 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 A0A1W2PQD8 194 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 BIN1O00499 593 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 GUCY1A2P33402 732 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 SLC4A8Q2Y0W8 1093 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 ANO10Q9NW15 660 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 KCNJ14Q9UNX9 436 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 DOCK2Q92608 1830 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 ESR2Q92731 530 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 C4BP0C0L5 1744 aa15.81■□□□□ 0.12
SRSF1-205ENST00000582730 TNKSO95271 1327 aa15.8■□□□□ 0.12
SRSF1-205ENST00000582730 ZNF654Q8IZM8 581 aa15.8■□□□□ 0.12
SRSF1-205ENST00000582730 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
SRSF1-205ENST00000582730 ATP2B1P20020 1258 aa15.8■□□□□ 0.12
SRSF1-205ENST00000582730 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
SRSF1-205ENST00000582730 CEP57L1Q8IYX8 460 aa15.8■□□□□ 0.12
SRSF1-205ENST00000582730 ARHGEF1Q92888 912 aaKnown RBP15.8■□□□□ 0.12
SRSF1-205ENST00000582730 AATFQ9NY61 560 aaKnown RBP eCLIP15.8■□□□□ 0.12
SRSF1-205ENST00000582730 FMNL1O95466 1100 aaPredicted RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 PFKFB1P16118 471 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms