RNA–Protein interactions for RNA: ENST00000581104.5

NUP85-216, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 2,233 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-216ENST00000581104 SLC4A3P48751 1232 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 CCDC129Q6ZRS4 1044 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 USP48Q86UV5 1035 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 FAM83AQ86UY5 434 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 RBM46Q8TBY0 533 aaKnown RBP11.3□□□□□ -0.6
NUP85-216ENST00000581104 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
NUP85-216ENST00000581104 USP26Q9BXU7 913 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 GLIS2Q9BZE0 524 aaPredicted RBP11.3□□□□□ -0.6
NUP85-216ENST00000581104 DEFB129Q9H1M3 183 aa11.3□□□□□ -0.6
NUP85-216ENST00000581104 ENTPD3O75355 529 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 RASA3Q14644 834 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 MAPKAPK5Q8IW41 473 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 SDR42E1Q8WUS8 393 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 DDRGK1Q96HY6 314 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
NUP85-216ENST00000581104 FAM198AQ9UFP1 575 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 PPP2R3BQ9Y5P8 575 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
NUP85-216ENST00000581104 CCDC171Q6TFL3 1326 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 CNTNAP1P78357 1384 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 PRKAB2O43741 272 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 NPM3O75607 178 aaKnown RBP11.29□□□□□ -0.6
NUP85-216ENST00000581104 APPP05067 770 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 ZSCAN29Q8IWY8 852 aaPredicted RBP11.29□□□□□ -0.6
NUP85-216ENST00000581104 FAM151AQ8WW52 585 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 ESYT1Q9BSJ8 1104 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 FLT1P17948 1338 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 RAD50Q92878 1312 aa11.29□□□□□ -0.6
NUP85-216ENST00000581104 CDK5RAP2Q96SN8 1893 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 ZNF589Q86UQ0 364 aaPredicted RBP11.28□□□□□ -0.6
NUP85-216ENST00000581104 PKNOX2Q96KN3 472 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 KIF2CQ99661 725 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 TMEM39BQ9GZU3 492 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 OSBPL5Q9H0X9 879 aaPredicted RBP11.28□□□□□ -0.6
NUP85-216ENST00000581104 ATP8A2Q9NTI2 1148 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 FOCADQ5VW36 1801 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 SGSM2O43147 1006 aa11.28□□□□□ -0.6
NUP85-216ENST00000581104 PATL2C9JE40 543 aaKnown RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 PRAMEF18Q5VWM3 479 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 ZFPM1Q8IX07 1006 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 NACAP1Q9BZK3 213 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 DCP1AQ9NPI6 582 aaPredicted RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 SAP30BPQ9UHR5 308 aaKnown RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 RPAP1Q9BWH6 1393 aaPredicted RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 NAV1Q8NEY1 1877 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 GSG1L2A8MUP6 293 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 TRAF5O00463 557 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 TDO2P48775 406 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 FSTL1Q12841 308 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 DLK2Q6UY11 383 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 AMOTL1Q8IY63 956 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 DHX36Q9H2U1 1008 aaKnown RBP11.27□□□□□ -0.61
NUP85-216ENST00000581104 MCM9Q9NXL9 1143 aa11.27□□□□□ -0.61
NUP85-216ENST00000581104 COL2A1P02458 1487 aaPredicted RBP11.26□□□□□ -0.61
NUP85-216ENST00000581104 ITGBL1O95965 494 aaPredicted RBP11.26□□□□□ -0.61
NUP85-216ENST00000581104 POLR3DP05423 398 aaPredicted RBP11.26□□□□□ -0.61
NUP85-216ENST00000581104 HLA-DOAP06340 250 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 NF2P35240 595 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 SUPT20HL1Q3ZLR7 823 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 VPS53Q5VIR6 699 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 HOOK2Q96ED9 719 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 ZNF408Q9H9D4 720 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 PALD1Q9ULE6 856 aa11.26□□□□□ -0.61
NUP85-216ENST00000581104 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 EPB41L2O43491 1005 aaKnown RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 HSPD1P10809 573 aaKnown RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 SLC4A8Q2Y0W8 1093 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 NBPF12Q5TAG4 269 aaPredicted RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 SH3BP5LQ7L8J4 393 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 IFNL3Q8IZI9 196 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 TEPSINQ96N21 525 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 NAPBQ9H115 298 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 ATRNL1Q5VV63 1379 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 MYH1P12882 1939 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 FMR1Q06787 632 aaKnown RBP eCLIP11.25□□□□□ -0.61
NUP85-216ENST00000581104 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 CDAN1Q8IWY9 1227 aa11.25□□□□□ -0.61
NUP85-216ENST00000581104 EPB41L4AQ9HCS5 686 aaPredicted RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 ARPP21Q9UBL0 812 aaPredicted RBP11.25□□□□□ -0.61
NUP85-216ENST00000581104 USP17L12C9JPN9 530 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 USP17L21D6R901 530 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 REC8O95072 547 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 DSCC1Q9BVC3 393 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 TRIM34Q9BYJ4 488 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 PI4KBQ9UBF8 816 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 BAZ2AQ9UIF9 1905 aaKnown RBP11.24□□□□□ -0.61
NUP85-216ENST00000581104 DDX60LQ5H9U9 1706 aaKnown RBP11.24□□□□□ -0.61
NUP85-216ENST00000581104 FOXP2O15409 715 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 CELF2O95319 508 aaKnown RBP11.24□□□□□ -0.61
NUP85-216ENST00000581104 DCAF15Q66K64 600 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 CTR9Q6PD62 1173 aa11.24□□□□□ -0.61
NUP85-216ENST00000581104 CRACR2BQ8N4Y2 399 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms