RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 EXOSC10Q01780 885 aaKnown RBP13.07□□□□□ -0.32
SKA2-206ENST00000581068 AKNAD1Q5T1N1 836 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 TBC1D10CQ8IV04 446 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 AMOTL1Q8IY63 956 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 TGFBRAP1Q8WUH2 860 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 STAG1Q8WVM7 1258 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 ZSCAN31Q96LW9 406 aaPredicted RBP13.07□□□□□ -0.32
SKA2-206ENST00000581068 GMLQ99445 158 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 KRT23Q9C075 422 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 NBPF3Q9H094 633 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 CNNM2Q9H8M5 875 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 USP40Q9NVE5 1235 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 MKRN1Q9UHC7 482 aaKnown RBP13.07□□□□□ -0.32
SKA2-206ENST00000581068 LIMCH1Q9UPQ0 1083 aa13.07□□□□□ -0.32
SKA2-206ENST00000581068 ZNF646O15015 1829 aaPredicted RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 SLC3A2P08195 630 aaKnown RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 MCM5P33992 734 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 MMP14P50281 582 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 APOBEC3HQ6NTF7 200 aaKnown RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 POTEHQ6S545 545 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 MB21D2Q8IYB1 491 aaPredicted RBP13.06□□□□□ -0.32
SKA2-206ENST00000581068 MCM9Q9NXL9 1143 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 WDR19Q8NEZ3 1342 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 PSME4Q14997 1843 aa13.06□□□□□ -0.32
SKA2-206ENST00000581068 LAMA4Q16363 1823 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 FZD9O00144 591 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 HSP90AA1P07900 732 aaKnown RBP13.05□□□□□ -0.32
SKA2-206ENST00000581068 PRELPP51888 382 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 FGD1P98174 961 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 CFAP100Q494V2 611 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 C12orf60Q5U649 245 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 CDC42EP5Q6NZY7 148 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 SAMD1Q6SPF0 538 aaPredicted RBP13.05□□□□□ -0.32
SKA2-206ENST00000581068 Q6ZUG5 572 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 NOL8Q76FK4 1167 aaKnown RBP13.05□□□□□ -0.32
SKA2-206ENST00000581068 MAPKAPK5Q8IW41 473 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 OGFOD1Q8N543 542 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 TMX3Q96JJ7 454 aa13.05□□□□□ -0.32
SKA2-206ENST00000581068 CYP2D7A0A087X1C5 515 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 PRC1O43663 620 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 ABCB7O75027 752 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 POLR3DP05423 398 aaPredicted RBP13.04□□□□□ -0.32
SKA2-206ENST00000581068 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 LMNB1P20700 586 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 RPS12P25398 132 aaKnown RBP13.04□□□□□ -0.32
SKA2-206ENST00000581068 COL9A3Q14050 684 aaPredicted RBP13.04□□□□□ -0.32
SKA2-206ENST00000581068 TCEANC2Q96MN5 208 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 TOMM22Q9NS69 142 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 ZBTB12Q9Y330 459 aaPredicted RBP13.04□□□□□ -0.32
SKA2-206ENST00000581068 TIAM2Q8IVF5 1701 aa13.04□□□□□ -0.32
SKA2-206ENST00000581068 B4E1Z4 1266 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 FGRP09769 529 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 CYP2D6P10635 497 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 NT5C2P49902 561 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 PDE4BQ07343 736 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 TOB2Q14106 344 aaPredicted RBP13.03□□□□□ -0.32
SKA2-206ENST00000581068 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 STK11IPQ8N1F8 1099 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 FBXL16Q8N461 479 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 INCENPQ9NQS7 918 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 SH2B1Q9NRF2 756 aaPredicted RBP13.03□□□□□ -0.32
SKA2-206ENST00000581068 SAP30BPQ9UHR5 308 aaKnown RBP13.03□□□□□ -0.32
SKA2-206ENST00000581068 TACC3Q9Y6A5 838 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 FLT1P17948 1338 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 NEDD4P46934 1319 aa13.03□□□□□ -0.32
SKA2-206ENST00000581068 ORC4O43929 436 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 WDHD1O75717 1129 aaPredicted RBP13.02□□□□□ -0.33
SKA2-206ENST00000581068 ANTXR2P58335 489 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 PICALMQ13492 652 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 CUL4AQ13619 759 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 RRP12Q5JTH9 1297 aaKnown RBP13.02□□□□□ -0.33
SKA2-206ENST00000581068 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 CHST3Q7LGC8 479 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 TTC6Q86TZ1 520 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 MTMR14Q8NCE2 650 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 ESR2Q92731 530 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 TMEM87BQ96K49 555 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 LARP6Q9BRS8 491 aaKnown RBP13.02□□□□□ -0.33
SKA2-206ENST00000581068 MTA3Q9BTC8 594 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 IDI2Q9BXS1 227 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 LRRC2Q9BYS8 371 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 ZSWIM5Q9P217 1185 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.02□□□□□ -0.33
SKA2-206ENST00000581068 PCDHAC2Q9Y5I4 1007 aa13.02□□□□□ -0.33
SKA2-206ENST00000581068 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
SKA2-206ENST00000581068 KDM4AO75164 1064 aa13.01□□□□□ -0.33
SKA2-206ENST00000581068 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
SKA2-206ENST00000581068 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.334e-8■□□□□ 8.4
SKA2-206ENST00000581068 DPF2Q92785 391 aa13.01□□□□□ -0.33
SKA2-206ENST00000581068 BRF1Q92994 677 aa13.01□□□□□ -0.33
SKA2-206ENST00000581068 INTS4Q96HW7 963 aaKnown RBP13.01□□□□□ -0.33
SKA2-206ENST00000581068 PRMT6Q96LA8 375 aaPredicted RBP13.01□□□□□ -0.33
SKA2-206ENST00000581068 OSBPL5Q9H0X9 879 aaPredicted RBP13.01□□□□□ -0.33
SKA2-206ENST00000581068 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
SKA2-206ENST00000581068 ZNF287Q9HBT7 754 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms