RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 SMCR8Q8TEV9 937 aaPredicted RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 DEFB118Q96PH6 123 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 SLC45A1Q9Y2W3 748 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
RFFL-208ENST00000581039 RANBP2P49792 3224 aaKnown RBP12.4□□□□□ -0.42
RFFL-208ENST00000581039 PTPRCP08575 1304 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 ENTPD3O75355 529 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 INHAP05111 366 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 RFX5P48382 616 aaPredicted RBP12.39□□□□□ -0.43
RFFL-208ENST00000581039 RGS3P49796 1198 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 IRF5Q13568 498 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 COA7Q96BR5 231 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 IDI2Q9BXS1 227 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 CEP126Q9P2H0 1117 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 TAOK2Q9UL54 1235 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 DENND2AQ9ULE3 1009 aa12.39□□□□□ -0.43
RFFL-208ENST00000581039 SEMA3EO15041 775 aa12.38□□□□□ -0.43
RFFL-208ENST00000581039 ANP32CO43423 234 aa12.38□□□□□ -0.43
RFFL-208ENST00000581039 CTNND1O60716 968 aaKnown RBP12.38□□□□□ -0.43
RFFL-208ENST00000581039 ATP2B3Q16720 1220 aa12.38□□□□□ -0.43
RFFL-208ENST00000581039 ATG9AQ7Z3C6 839 aa12.38□□□□□ -0.43
RFFL-208ENST00000581039 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
RFFL-208ENST00000581039 STAP2Q9UGK3 403 aa12.38□□□□□ -0.43
RFFL-208ENST00000581039 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 TRIM75PA6NK02 468 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 FAM9BQ8IZU0 186 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 ANKRD13CQ8N6S4 541 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 SIL1Q9H173 461 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
RFFL-208ENST00000581039 CIAO1O76071 339 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 MAP3K10Q02779 954 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 SH3BP5LQ7L8J4 393 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 NECAB2Q7Z6G3 386 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 DZIP1Q86YF9 867 aaKnown RBP12.36□□□□□ -0.43
RFFL-208ENST00000581039 PAWRQ96IZ0 340 aaKnown RBP12.36□□□□□ -0.43
RFFL-208ENST00000581039 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 PAK6Q9NQU5 681 aaPredicted RBP12.36□□□□□ -0.43
RFFL-208ENST00000581039 PNMA3Q9UL41 463 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 AGTPBP1Q9UPW5 1226 aa12.36□□□□□ -0.43
RFFL-208ENST00000581039 ATRNL1Q5VV63 1379 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 DDTLA6NHG4 134 aaPredicted RBP12.35□□□□□ -0.43
RFFL-208ENST00000581039 SOX1O00570 391 aaPredicted RBP12.35□□□□□ -0.43
RFFL-208ENST00000581039 PHKA1P46020 1223 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 PICALMQ13492 652 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 LRCH3Q96II8 777 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 ABCF2Q9UG63 623 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 GAKO14976 1311 aa12.35□□□□□ -0.43
RFFL-208ENST00000581039 SLURP2P0DP57 97 aa12.34□□□□□ -0.43
RFFL-208ENST00000581039 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
RFFL-208ENST00000581039 FAM110CQ1W6H9 321 aa12.34□□□□□ -0.43
RFFL-208ENST00000581039 SPTY2D1Q68D10 685 aaPredicted RBP12.34□□□□□ -0.43
RFFL-208ENST00000581039 CCDC102BQ68D86 513 aa12.34□□□□□ -0.43
RFFL-208ENST00000581039 FAM163AQ96GL9 167 aaPredicted RBP12.34□□□□□ -0.43
RFFL-208ENST00000581039 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
RFFL-208ENST00000581039 TBC1D12O60347 775 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 UBTFL1P0CB47 393 aaPredicted RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 BMP8BP34820 402 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 BTDP43251 543 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 GCLCP48506 637 aaPredicted RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 SPP2Q13103 211 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 PABPC4Q13310 644 aaKnown RBP eCLIP12.33□□□□□ -0.44
RFFL-208ENST00000581039 TREML2Q5T2D2 321 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 CCDC84Q86UT8 332 aaPredicted RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 ANKLE1Q8NAG6 615 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.33□□□□□ -0.44
RFFL-208ENST00000581039 DDX4Q9NQI0 724 aaKnown RBP12.33□□□□□ -0.44
RFFL-208ENST00000581039 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
RFFL-208ENST00000581039 ZBTB22O15209 634 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 HMGCRP04035 888 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 ADORA1P30542 326 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 TIMM10P62072 90 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 ERICH6Q7L0X2 663 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 C7orf61Q8IZ16 206 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 GDF15Q99988 308 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 NBPF3Q9H094 633 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 HMX1Q9NP08 348 aaPredicted RBP12.32□□□□□ -0.44
RFFL-208ENST00000581039 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.32□□□□□ -0.44
RFFL-208ENST00000581039 RPTORQ8N122 1335 aa12.32□□□□□ -0.44
RFFL-208ENST00000581039 MGAMO43451 1857 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 GPR75-ASB3A0A0A6YYF3 556 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 E9PSI1 815 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 RASGRF1Q13972 1273 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 ZNF280CQ8ND82 737 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 TBC1D2Q9BYX2 928 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 OSBPL5Q9H0X9 879 aaPredicted RBP12.31□□□□□ -0.44
RFFL-208ENST00000581039 ZMYND8Q9ULU4 1186 aaPredicted RBP12.31□□□□□ -0.44
RFFL-208ENST00000581039 PA2G4Q9UQ80 394 aaKnown RBP12.31□□□□□ -0.44
RFFL-208ENST00000581039 MROH7-TTC4A0A0A0MT08 1334 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 ZNF521Q96K83 1311 aa12.31□□□□□ -0.44
RFFL-208ENST00000581039 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
RFFL-208ENST00000581039 LDHCP07864 332 aa12.3□□□□□ -0.44
RFFL-208ENST00000581039 HMGCS2P54868 508 aa12.3□□□□□ -0.44
RFFL-208ENST00000581039 GSTO1P78417 241 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms