RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 FAM151AQ8WW52 585 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 NAPBQ9H115 298 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 ANO2Q9NQ90 1003 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 TAOK2Q9UL54 1235 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 PCDHAC2Q9Y5I4 1007 aa17.06■□□□□ 0.32
SKA2-205ENST00000580541 TCP10L2B9ZVM9 353 aa17.05■□□□□ 0.32
SKA2-205ENST00000580541 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 POLR3DP05423 398 aaPredicted RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 CDC37L1Q7L3B6 337 aa17.05■□□□□ 0.32
SKA2-205ENST00000580541 ZNF589Q86UQ0 364 aaPredicted RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 ZSCAN29Q8IWY8 852 aaPredicted RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
SKA2-205ENST00000580541 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 NMRK2Q9NPI5 230 aa17.05■□□□□ 0.32
SKA2-205ENST00000580541 GGA3Q9NZ52 723 aa17.05■□□□□ 0.32
SKA2-205ENST00000580541 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
SKA2-205ENST00000580541 GSG1L2A8MUP6 293 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 HLA-DOAP06340 250 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 SLC3A2P08195 630 aaKnown RBP17.04■□□□□ 0.32
SKA2-205ENST00000580541 PICALMQ13492 652 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 SDR42E1Q8WUS8 393 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 DEFB129Q9H1M3 183 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 DCP1AQ9NPI6 582 aaPredicted RBP17.04■□□□□ 0.32
SKA2-205ENST00000580541 MCM9Q9NXL9 1143 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 ARPP21Q9UBL0 812 aaPredicted RBP17.04■□□□□ 0.32
SKA2-205ENST00000580541 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
SKA2-205ENST00000580541 PRKAB2O43741 272 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 TCP10Q12799 353 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 RNF20Q5VTR2 975 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 KRT26Q7Z3Y9 468 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 MAP4K1Q92918 833 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 OSBPL5Q9H0X9 879 aaPredicted RBP17.03■□□□□ 0.32
SKA2-205ENST00000580541 ZNF287Q9HBT7 754 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 PI4KBQ9UBF8 816 aa17.03■□□□□ 0.32
SKA2-205ENST00000580541 ZMYM6O95789 1325 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 FLT1P17948 1338 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 FGAP02671 866 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 MCCP23508 829 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 CACNB3P54284 484 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 RASA3Q14644 834 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 IMMTQ16891 758 aaKnown RBP17.02■□□□□ 0.32
SKA2-205ENST00000580541 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 FOXP4Q8IVH2 680 aaPredicted RBP17.02■□□□□ 0.32
SKA2-205ENST00000580541 TRIM34Q9BYJ4 488 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 FAM198AQ9UFP1 575 aa17.02■□□□□ 0.32
SKA2-205ENST00000580541 POLR2AP24928 1970 aaKnown RBP17.01■□□□□ 0.31
SKA2-205ENST00000580541 ZNF213O14771 459 aa17.01■□□□□ 0.31
SKA2-205ENST00000580541 NF2P35240 595 aa17.01■□□□□ 0.31
SKA2-205ENST00000580541 NFIAQ12857 509 aa17.01■□□□□ 0.31
SKA2-205ENST00000580541 C8orf34Q49A92 452 aa17.01■□□□□ 0.31
SKA2-205ENST00000580541 MKRN1Q9UHC7 482 aaKnown RBP17.01■□□□□ 0.31
SKA2-205ENST00000580541 USP17L12C9JPN9 530 aa17■□□□□ 0.31
SKA2-205ENST00000580541 USP17L21D6R901 530 aa17■□□□□ 0.31
SKA2-205ENST00000580541 VPS53Q5VIR6 699 aa17■□□□□ 0.31
SKA2-205ENST00000580541 CHADLQ6NUI6 762 aa17■□□□□ 0.31
SKA2-205ENST00000580541 LSG1Q9H089 658 aaKnown RBP17■□□□□ 0.31
SKA2-205ENST00000580541 DDX4Q9NQI0 724 aaKnown RBP17■□□□□ 0.31
SKA2-205ENST00000580541 COL2A1P02458 1487 aaPredicted RBP16.99■□□□□ 0.31
SKA2-205ENST00000580541 MINDY4BA8MYZ0 360 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 PCP11498 1178 aaKnown RBP16.99■□□□□ 0.31
SKA2-205ENST00000580541 ZKSCAN1P17029 563 aaPredicted RBP16.99■□□□□ 0.31
SKA2-205ENST00000580541 NT5C2P49902 561 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 C12orf60Q5U649 245 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 DCAF15Q66K64 600 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 CTR9Q6PD62 1173 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 CRACR2BQ8N4Y2 399 aaPredicted RBP16.99■□□□□ 0.31
SKA2-205ENST00000580541 CSRNP1Q96S65 589 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 SAP30BPQ9UHR5 308 aaKnown RBP16.99■□□□□ 0.31
SKA2-205ENST00000580541 PALD1Q9ULE6 856 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 ADAMTSL1Q8N6G6 1762 aa16.99■□□□□ 0.31
SKA2-205ENST00000580541 ASTN2O75129 1339 aaPredicted RBP16.98■□□□□ 0.31
SKA2-205ENST00000580541 PTH1RQ03431 593 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 PDE4BQ07343 736 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 ZNF784Q8NCA9 323 aaPredicted RBP16.98■□□□□ 0.31
SKA2-205ENST00000580541 USP26Q9BXU7 913 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 BACH2Q9BYV9 841 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 TMEM39BQ9GZU3 492 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 EHD4Q9H223 541 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 IL25Q9H293 177 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 RNF41Q9H4P4 317 aaPredicted RBP16.98■□□□□ 0.31
SKA2-205ENST00000580541 SWAP70Q9UH65 585 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
SKA2-205ENST00000580541 SERPINB13Q9UIV8 391 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 RBM8AQ9Y5S9 174 aaKnown RBP16.98■□□□□ 0.31
SKA2-205ENST00000580541 ATRNL1Q5VV63 1379 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 MYH1P12882 1939 aa16.98■□□□□ 0.31
SKA2-205ENST00000580541 TBC1D12O60347 775 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 TOMM70O94826 608 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 PPARAQ07869 468 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 SMC1BQ8NDV3 1235 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 EPB41L4AQ9HCS5 686 aaPredicted RBP16.97■□□□□ 0.31
SKA2-205ENST00000580541 ANAPC4Q9UJX5 808 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 FOCADQ5VW36 1801 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 CNTNAP1P78357 1384 aa16.97■□□□□ 0.31
SKA2-205ENST00000580541 PPP1R12BO60237 982 aaPredicted RBP16.96■□□□□ 0.31
SKA2-205ENST00000580541 TRDNQ13061 729 aa16.96■□□□□ 0.31
SKA2-205ENST00000580541 KRT32Q14532 448 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms