RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 FAM84BQ96KN1 310 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 ASB2Q96Q27 587 aa18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 PRDM5Q9NQX1 630 aaPredicted RBP18.01■□□□□ 0.47
CSNK1D-213ENST00000580446 A0A1B0GUL6 1792 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 NEXNQ0ZGT2 675 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 LHX8Q68G74 356 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 C8orf58Q8NAV2 365 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 BADQ92934 168 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 ZDHHC15Q96MV8 337 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 PLA2G12BQ9BX93 195 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 DNAH12Q6ZR08 3092 aa18■□□□□ 0.47
CSNK1D-213ENST00000580446 RPAP1Q9BWH6 1393 aaPredicted RBP18■□□□□ 0.47
CSNK1D-213ENST00000580446 PTPRAP18433 802 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 RTP1P59025 263 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 CACNB2Q08289 660 aaPredicted RBP17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 CCDC85BQ15834 202 aaPredicted RBP17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 FAM110CQ1W6H9 321 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 POTEEQ6S8J3 1075 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 PRKAG2Q9UGJ0 569 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 ATP11BQ9Y2G3 1177 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 AFG3L2Q9Y4W6 797 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 DOCK3Q8IZD9 2030 aa17.99■□□□□ 0.47
CSNK1D-213ENST00000580446 IFIT5Q13325 482 aaKnown RBP17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 GCKRQ14397 625 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 PDE3AQ14432 1141 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 CCL14Q16627 93 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 THEGQ9P2T0 379 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 HCN4Q9Y3Q4 1203 aa17.98■□□□□ 0.47
CSNK1D-213ENST00000580446 FKBP1CQ5VVH2 108 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 G2E3Q7L622 706 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 SCYL3Q8IZE3 742 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 FAM151AQ8WW52 585 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 LRFN3Q9BTN0 628 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 CNNM1Q9NRU3 951 aa17.97■□□□□ 0.47
CSNK1D-213ENST00000580446 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.47
CSNK1D-213ENST00000580446 EPHX3Q9H6B9 360 aa17.96■□□□□ 0.47
CSNK1D-213ENST00000580446 AGTPBP1Q9UPW5 1226 aa17.96■□□□□ 0.47
CSNK1D-213ENST00000580446 SLC45A1Q9Y2W3 748 aa17.96■□□□□ 0.47
CSNK1D-213ENST00000580446 LTBP2Q14767 1821 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 MAST2Q6P0Q8 1798 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 PHF20L1A8MW92 1017 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 EPHB4P54760 987 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 HDLBPQ00341 1268 aaKnown RBP17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 LDHAL6AQ6ZMR3 332 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 SH3RF1Q7Z6J0 888 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 C1QTNF1Q9BXJ1 281 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 FAM198AQ9UFP1 575 aa17.95■□□□□ 0.46
CSNK1D-213ENST00000580446 FRAT2O75474 233 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 ZKSCAN1P17029 563 aaPredicted RBP17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 FOXO4P98177 505 aa17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 TAF7LQ5H9L4 462 aa17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 EPHA10Q5JZY3 1008 aa17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 CDC42EP5Q6NZY7 148 aa17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 RNPC3Q96LT9 517 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 PUS3Q9BZE2 481 aaKnown RBP17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 NCOR1O75376 2440 aa17.94■□□□□ 0.46
CSNK1D-213ENST00000580446 MRPS5P82675 430 aaKnown RBP17.93■□□□□ 0.46
CSNK1D-213ENST00000580446 DIXDC1Q155Q3 683 aa17.93■□□□□ 0.46
CSNK1D-213ENST00000580446 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
CSNK1D-213ENST00000580446 IL27Q8NEV9 243 aa17.93■□□□□ 0.46
CSNK1D-213ENST00000580446 CLSPNQ9HAW4 1339 aa17.93■□□□□ 0.46
CSNK1D-213ENST00000580446 FAM86C2PA6NEL3 165 aa17.92■□□□□ 0.46
CSNK1D-213ENST00000580446 DNAJB2P25686 324 aa17.92■□□□□ 0.46
CSNK1D-213ENST00000580446 LMBR1LQ6UX01 489 aa17.92■□□□□ 0.46
CSNK1D-213ENST00000580446 VPS37DQ86XT2 251 aa17.92■□□□□ 0.46
CSNK1D-213ENST00000580446 DAGLAQ9Y4D2 1042 aa17.92■□□□□ 0.46
CSNK1D-213ENST00000580446 ATRNL1Q5VV63 1379 aa17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 PLXNB2O15031 1838 aa17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 CCDC30Q5VVM6 783 aa17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 PRDM12Q9H4Q4 367 aa17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 ZNF576Q9H609 170 aa17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 SPINK5Q9NQ38 1064 aaPredicted RBP17.91■□□□□ 0.46
CSNK1D-213ENST00000580446 MUC6Q6W4X9 2439 aa17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 TRIM43BA6NCK2 446 aa17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 TRIM60Q495X7 471 aa17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 TRIM43Q96BQ3 446 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 ASCC2Q9H1I8 757 aaPredicted RBP17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 PNMA3Q9UL41 463 aa17.9■□□□□ 0.46
CSNK1D-213ENST00000580446 FAM196BA6NMK8 535 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 ZNF853P0CG23 659 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 ITGB8P26012 769 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 TFF2Q03403 129 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 FBXO33Q7Z6M2 555 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 TBC1D22AQ8WUA7 517 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 NUDT12Q9BQG2 462 aa17.89■□□□□ 0.45
CSNK1D-213ENST00000580446 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 HMGCS2P54868 508 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 ADGRE1Q14246 886 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 GJC2Q5T442 439 aaPredicted RBP17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 SH3BP5LQ7L8J4 393 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 TXNRD2Q9NNW7 524 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 PDLIM7Q9NR12 457 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 USP40Q9NVE5 1235 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 LRRFIP2Q9Y608 721 aaKnown RBP17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 NDUFB9Q9Y6M9 179 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 CACNA1AO00555 2505 aa17.88■□□□□ 0.45
CSNK1D-213ENST00000580446 CNGA1P29973 690 aa17.87■□□□□ 0.45
CSNK1D-213ENST00000580446 PBX2P40425 430 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms