RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
RTTN-205ENST00000580034 PCDHB11Q9Y5F2 797 aa6.33□□□□□ -1.4
RTTN-205ENST00000580034 NRXN2Q9P2S2 1712 aa6.33□□□□□ -1.4
RTTN-205ENST00000580034 RTL1A6NKG5 1358 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 CNTNAP4Q9C0A0 1308 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 USP42Q9H9J4 1324 aaKnown RBP6.32□□□□□ -1.4
RTTN-205ENST00000580034 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
RTTN-205ENST00000580034 TRIM66O15016 1216 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 C21orf2O43822 256 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 RPS6KA4O75676 772 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 NID1P14543 1247 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 FBLN1P23142 703 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 SSTR4P31391 388 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 MICALL1Q8N3F8 863 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 COG3Q96JB2 828 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 HACL1Q9UJ83 578 aa6.32□□□□□ -1.4
RTTN-205ENST00000580034 RNF123Q5XPI4 1314 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 ANKRD31Q8N7Z5 1873 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 H0YIN7 160 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 EPHX2P34913 555 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
RTTN-205ENST00000580034 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-205ENST00000580034 SYT9Q86SS6 491 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 C1orf216Q8TAB5 229 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 ZNF622Q969S3 477 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-205ENST00000580034 RSPH6AQ9H0K4 717 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 DDX21Q9NR30 783 aaKnown RBP eCLIP6.31□□□□□ -1.4
RTTN-205ENST00000580034 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 STARD13Q9Y3M8 1113 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 OAS3Q9Y6K5 1087 aaKnown RBP6.31□□□□□ -1.4
RTTN-205ENST00000580034 A0A1W2PP64 1363 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 CARMIL3Q8ND23 1372 aa6.31□□□□□ -1.4
RTTN-205ENST00000580034 TJP1Q07157 1748 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 ADAMTS7Q9UKP4 1686 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 ADARB2-AS1A8MUL3 147 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 ALBP02768 609 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 MAP2K2P36507 400 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.4
RTTN-205ENST00000580034 CIAPIN1Q6FI81 312 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 PNMA8AQ86V59 439 aaPredicted RBP6.3□□□□□ -1.4
RTTN-205ENST00000580034 MARK1Q9P0L2 795 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 SPG7Q9UQ90 795 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 ARFGEF2Q9Y6D5 1785 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 AKAP11Q9UKA4 1901 aa6.3□□□□□ -1.4
RTTN-205ENST00000580034 ZNF541Q9H0D2 1346 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 SCN11AQ9UI33 1791 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 A0A1W2PNR3 127 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 AP1G2O75843 785 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 ATP4AP20648 1035 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 CRKLP46109 303 aaKnown RBP6.29□□□□□ -1.4
RTTN-205ENST00000580034 PLA2G4AP47712 749 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
RTTN-205ENST00000580034 BRPF1P55201 1214 aaPredicted RBP6.29□□□□□ -1.4
RTTN-205ENST00000580034 USPL1Q5W0Q7 1092 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 SLC4A9Q96Q91 983 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 TERF2IPQ9NYB0 399 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 ANKRD26Q9UPS8 1709 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 SLX4Q8IY92 1834 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 CUL9Q8IWT3 2517 aa6.29□□□□□ -1.4
RTTN-205ENST00000580034 LTBP3Q9NS15 1303 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 KIF20BQ96Q89 1820 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 A0A0A0MRY4 1105 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 BICDL1Q6ZP65 573 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 SLC17A8Q8NDX2 589 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 HMX1Q9NP08 348 aaPredicted RBP6.28□□□□□ -1.4
RTTN-205ENST00000580034 RAB3GAP2Q9H2M9 1393 aa6.28□□□□□ -1.4
RTTN-205ENST00000580034 SZT2Q5T011 3432 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 BCORQ6W2J9 1755 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 ZBBXA8MT70 800 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 TRAF5O00463 557 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 NPHP1O15259 732 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 PTCD1O75127 700 aaKnown RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 SIN3BO75182 1162 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 SERPINB2P05120 415 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 FAM157BP0CG42 384 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 LMOD1P29536 600 aaPredicted RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 TM4SF1P30408 202 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 GP2P55259 537 aaKnown RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 NFIXQ14938 502 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 ARSJQ5FYB0 599 aaPredicted RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 SLC12A5Q9H2X9 1139 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 ZNF408Q9H9D4 720 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 ROCK2O75116 1388 aaKnown RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 FLT4P35916 1363 aa6.27□□□□□ -1.41
RTTN-205ENST00000580034 MKI67P46013 3256 aaKnown RBP6.27□□□□□ -1.41
RTTN-205ENST00000580034 CELF2O95319 508 aaKnown RBP6.26□□□□□ -1.41
RTTN-205ENST00000580034 PHKG2P15735 406 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 CD97P48960 835 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 SOGA3Q5TF21 947 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 RTN4Q9NQC3 1192 aaKnown RBP6.26□□□□□ -1.41
RTTN-205ENST00000580034 GJA3Q9Y6H8 435 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 INSRP06213 1382 aa6.26□□□□□ -1.41
RTTN-205ENST00000580034 PDE6BP35913 854 aa6.25□□□□□ -1.41
RTTN-205ENST00000580034 CST9Q5W186 159 aa6.25□□□□□ -1.41
RTTN-205ENST00000580034 PRPF40BQ6NWY9 871 aaKnown RBP6.25□□□□□ -1.41
RTTN-205ENST00000580034 CTU1Q7Z7A3 348 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms