RNA–Protein interactions for RNA: ENST00000580034.2

RTTN-205, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 824 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-205ENST00000580034 AEBP2Q6ZN18 517 aaPredicted RBP23.34■■□□□ 1.33
RTTN-205ENST00000580034 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
RTTN-205ENST00000580034 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
RTTN-205ENST00000580034 PHF23Q9BUL5 403 aaPredicted RBP19.68■□□□□ 0.74
RTTN-205ENST00000580034 FOXD1Q16676 465 aa18.76■□□□□ 0.59
RTTN-205ENST00000580034 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
RTTN-205ENST00000580034 MSH5O43196 834 aa17.82■□□□□ 0.44
RTTN-205ENST00000580034 PIAS4Q8N2W9 510 aaPredicted RBP17.34■□□□□ 0.37
RTTN-205ENST00000580034 PPP6R1Q9UPN7 881 aa17■□□□□ 0.31
RTTN-205ENST00000580034 ADRA2BP18089 450 aa16.9■□□□□ 0.3
RTTN-205ENST00000580034 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
RTTN-205ENST00000580034 CACNB1Q02641 598 aaPredicted RBP15.76■□□□□ 0.11
RTTN-205ENST00000580034 MAPK8IP2Q13387 824 aaPredicted RBP15.76■□□□□ 0.11
RTTN-205ENST00000580034 DMRT2Q9Y5R5 561 aa15.76■□□□□ 0.11
RTTN-205ENST00000580034 SCAF1Q9H7N4 1312 aaKnown RBP15.47■□□□□ 0.07
RTTN-205ENST00000580034 DCAF8L1A6NGE4 600 aa15.19■□□□□ 0.02
RTTN-205ENST00000580034 RNF39Q9H2S5 420 aa15.14■□□□□ 0.01
RTTN-205ENST00000580034 HOXD11P31277 338 aaPredicted RBP14.9□□□□□ -0.02
RTTN-205ENST00000580034 C1QBPQ07021 282 aaKnown RBP14.88□□□□□ -0.03
RTTN-205ENST00000580034 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
RTTN-205ENST00000580034 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
RTTN-205ENST00000580034 CNKSR2Q8WXI2 1034 aa14.55□□□□□ -0.08
RTTN-205ENST00000580034 DNAJC5BQ9UF47 199 aa14.52□□□□□ -0.09
RTTN-205ENST00000580034 POTEHQ6S545 545 aa14.46□□□□□ -0.09
RTTN-205ENST00000580034 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.22□□□□□ -0.13
RTTN-205ENST00000580034 DSG3P32926 999 aa13.95□□□□□ -0.18
RTTN-205ENST00000580034 NCBP3Q53F19 620 aaKnown RBP13.88□□□□□ -0.19
RTTN-205ENST00000580034 CAPN15O75808 1086 aa13.87□□□□□ -0.19
RTTN-205ENST00000580034 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
RTTN-205ENST00000580034 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
RTTN-205ENST00000580034 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
RTTN-205ENST00000580034 TRHP20396 242 aaPredicted RBP13.48□□□□□ -0.25
RTTN-205ENST00000580034 ABCB7O75027 752 aa13.47□□□□□ -0.25
RTTN-205ENST00000580034 ZNF219Q9P2Y4 722 aaPredicted RBP13.4□□□□□ -0.26
RTTN-205ENST00000580034 APLP2Q06481 763 aa13.36□□□□□ -0.27
RTTN-205ENST00000580034 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
RTTN-205ENST00000580034 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
RTTN-205ENST00000580034 SLC4A2P04920 1241 aa13.24□□□□□ -0.29
RTTN-205ENST00000580034 SP7Q8TDD2 431 aaPredicted RBP13.21□□□□□ -0.29
RTTN-205ENST00000580034 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.18□□□□□ -0.3
RTTN-205ENST00000580034 HNRNPUL2Q1KMD3 747 aaKnown RBP13.18□□□□□ -0.3
RTTN-205ENST00000580034 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
RTTN-205ENST00000580034 POLA2Q14181 598 aa12.95□□□□□ -0.34
RTTN-205ENST00000580034 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
RTTN-205ENST00000580034 PIP4P2Q8N4L2 257 aa12.85□□□□□ -0.35
RTTN-205ENST00000580034 HAX1O00165 279 aa12.84□□□□□ -0.35
RTTN-205ENST00000580034 KCNA4P22459 653 aa12.77□□□□□ -0.37
RTTN-205ENST00000580034 REM2Q8IYK8 340 aaPredicted RBP12.76□□□□□ -0.37
RTTN-205ENST00000580034 FXR2P51116 673 aaKnown RBP eCLIP12.66□□□□□ -0.38
RTTN-205ENST00000580034 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
RTTN-205ENST00000580034 PITPNM1O00562 1244 aa12.61□□□□□ -0.39
RTTN-205ENST00000580034 EVX2Q03828 476 aa12.61□□□□□ -0.39
RTTN-205ENST00000580034 ZBTB12Q9Y330 459 aaPredicted RBP12.6□□□□□ -0.39
RTTN-205ENST00000580034 OSCARQ8IYS5 282 aa12.53□□□□□ -0.4
RTTN-205ENST00000580034 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
RTTN-205ENST00000580034 LHX8Q68G74 356 aa12.4□□□□□ -0.42
RTTN-205ENST00000580034 GABBR2O75899 941 aa12.29□□□□□ -0.44
RTTN-205ENST00000580034 PRKAR2AP13861 404 aaKnown RBP12.29□□□□□ -0.44
RTTN-205ENST00000580034 C19orf67A6NJJ6 358 aa12.27□□□□□ -0.45
RTTN-205ENST00000580034 PLSCR2Q9NRY7 297 aa12.23□□□□□ -0.45
RTTN-205ENST00000580034 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
RTTN-205ENST00000580034 SPDYE2BA6NHP3 402 aa12.16□□□□□ -0.46
RTTN-205ENST00000580034 SPDYE6P0CI01 402 aa12.16□□□□□ -0.46
RTTN-205ENST00000580034 SPDYE2Q495Y8 402 aa12.16□□□□□ -0.46
RTTN-205ENST00000580034 SPDYE1Q8NFV5 336 aaPredicted RBP12.13□□□□□ -0.47
RTTN-205ENST00000580034 FOXD4L1Q9NU39 408 aa12.13□□□□□ -0.47
RTTN-205ENST00000580034 POTEIP0CG38 1075 aa12.01□□□□□ -0.49
RTTN-205ENST00000580034 CHADLQ6NUI6 762 aa12.01□□□□□ -0.49
RTTN-205ENST00000580034 FBLN2P98095 1184 aa12□□□□□ -0.49
RTTN-205ENST00000580034 ZNF692Q9BU19 519 aaPredicted RBP11.93□□□□□ -0.5
RTTN-205ENST00000580034 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
RTTN-205ENST00000580034 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
RTTN-205ENST00000580034 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
RTTN-205ENST00000580034 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
RTTN-205ENST00000580034 ATXN8OSP0DMR3 200 aa11.84□□□□□ -0.51
RTTN-205ENST00000580034 CLCN6P51797 869 aa11.84□□□□□ -0.51
RTTN-205ENST00000580034 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
RTTN-205ENST00000580034 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
RTTN-205ENST00000580034 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
RTTN-205ENST00000580034 POTEMA6NI47 508 aa11.71□□□□□ -0.53
RTTN-205ENST00000580034 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
RTTN-205ENST00000580034 OTUD5Q96G74 571 aa11.71□□□□□ -0.53
RTTN-205ENST00000580034 ZBTB22O15209 634 aa11.7□□□□□ -0.54
RTTN-205ENST00000580034 POTEGQ6S5H5 508 aa11.65□□□□□ -0.54
RTTN-205ENST00000580034 NISCHQ9Y2I1 1504 aa11.62□□□□□ -0.55
RTTN-205ENST00000580034 ZNF579Q8NAF0 562 aaKnown RBP11.62□□□□□ -0.55
RTTN-205ENST00000580034 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
RTTN-205ENST00000580034 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
RTTN-205ENST00000580034 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
RTTN-205ENST00000580034 GALR2O43603 387 aaPredicted RBP11.55□□□□□ -0.56
RTTN-205ENST00000580034 PELP1Q8IZL8 1130 aaKnown RBP11.4□□□□□ -0.58
RTTN-205ENST00000580034 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
RTTN-205ENST00000580034 PHF12Q96QT6 1004 aa11.35□□□□□ -0.59
RTTN-205ENST00000580034 PAK3O75914 559 aaPredicted RBP11.33□□□□□ -0.6
RTTN-205ENST00000580034 POTEJP0CG39 1038 aa11.32□□□□□ -0.6
RTTN-205ENST00000580034 FAM163AQ96GL9 167 aaPredicted RBP11.31□□□□□ -0.6
RTTN-205ENST00000580034 LCE2DQ5TA82 110 aaPredicted RBP11.3□□□□□ -0.6
RTTN-205ENST00000580034 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
RTTN-205ENST00000580034 METRNQ9UJH8 293 aa11.3□□□□□ -0.6
RTTN-205ENST00000580034 C7P10643 843 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms