RNA–Protein interactions for RNA: ENST00000579814.1

LIMD2-208, Transcript of LIM domain containing 2, human

TSL 2

Gene LIMD2, Length 709 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LIMD2-208	ENST00000579814	SNCAIP	Q9Y6H5	919 aa		31.97	■■■□□ 2.71
LIMD2-208	ENST00000579814	RFX7	Q2KHR2	1363 aa		31.96	■■■□□ 2.71
LIMD2-208	ENST00000579814	SPDYE5	A6NIY4	337 aa		31.96	■■■□□ 2.71
LIMD2-208	ENST00000579814	IDH1	O75874	414 aa	Known RBP	31.96	■■■□□ 2.71
LIMD2-208	ENST00000579814	PLCG2	P16885	1265 aa		31.96	■■■□□ 2.71
LIMD2-208	ENST00000579814	OTUD5	Q96G74	571 aa		31.96	■■■□□ 2.71
LIMD2-208	ENST00000579814	TESPA1	A2RU30	521 aa	Predicted RBP	31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	GTF2A2	P52657	109 aa		31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	PPP4C	P60510	307 aa		31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	SH3BP5L	Q7L8J4	393 aa		31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	TEX11	Q8IYF3	940 aa		31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	LRRCC1	Q9C099	1032 aa		31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	AATF	Q9NY61	560 aa	Known RBP eCLIP	31.95	■■■□□ 2.71
LIMD2-208	ENST00000579814	DDTL	A6NHG4	134 aa	Predicted RBP	31.94	■■■□□ 2.7
LIMD2-208	ENST00000579814	INPP5B	P32019	993 aa		31.94	■■■□□ 2.7
LIMD2-208	ENST00000579814	MAP3K12	Q12852	859 aa		31.94	■■■□□ 2.7
LIMD2-208	ENST00000579814	CFHR5	Q9BXR6	569 aa		31.94	■■■□□ 2.7
LIMD2-208	ENST00000579814	NDUFB9	Q9Y6M9	179 aa		31.94	■■■□□ 2.7
LIMD2-208	ENST00000579814	MYH2	Q9UKX2	1941 aa		31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	CYP7A1	P22680	504 aa		31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	TTF1	Q15361	905 aa	Predicted RBP	31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	MS4A4A	Q96JQ5	239 aa		31.93	■■■□□ 2.7
LIMD2-208	ENST00000579814	IGF2BP3	O00425	579 aa	Known RBP eCLIP	31.92	■■■□□ 2.7
LIMD2-208	ENST00000579814	TMED8	Q6PL24	325 aa	Predicted RBP	31.92	■■■□□ 2.7
LIMD2-208	ENST00000579814	ANTXR1	Q9H6X2	564 aa		31.92	■■■□□ 2.7
LIMD2-208	ENST00000579814	MAP3K10	Q02779	954 aa		31.91	■■■□□ 2.7
LIMD2-208	ENST00000579814	PPAT	Q06203	517 aa		31.91	■■■□□ 2.7
LIMD2-208	ENST00000579814	ADGRA1	Q86SQ6	560 aa		31.91	■■■□□ 2.7
LIMD2-208	ENST00000579814	DCTPP1	Q9H773	170 aa		31.91	■■■□□ 2.7
LIMD2-208	ENST00000579814	GPR25	O00155	361 aa		31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	CAPN15	O75808	1086 aa		31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	PPIL2	Q13356	520 aa		31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	NOM1	Q5C9Z4	860 aa	Known RBP	31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	MAGEB6	Q8N7X4	407 aa		31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	OSBPL5	Q9H0X9	879 aa	Predicted RBP	31.9	■■■□□ 2.7
LIMD2-208	ENST00000579814	CCL15-CCL14	A0A0B4J2E2	113 aa		31.89	■■■□□ 2.7
LIMD2-208	ENST00000579814	CCL15	Q16663	113 aa		31.89	■■■□□ 2.7
LIMD2-208	ENST00000579814	NOL9	Q5SY16	702 aa	Known RBP	31.89	■■■□□ 2.7
LIMD2-208	ENST00000579814	PTPN18	Q99952	460 aa		31.89	■■■□□ 2.7
LIMD2-208	ENST00000579814	ATRNL1	Q5VV63	1379 aa		31.89	■■■□□ 2.7
LIMD2-208	ENST00000579814	IRF6	O14896	467 aa		31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	SNAPC2	Q13487	334 aa		31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	DGKZ	Q13574	1117 aa		31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	CERS3	Q8IU89	383 aa		31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	ZNF296	Q8WUU4	475 aa	Predicted RBP	31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	BRI3BP	Q8WY22	251 aa		31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	DNAJC2	Q99543	621 aa	Known RBP	31.88	■■■□□ 2.69
LIMD2-208	ENST00000579814	AKAP11	Q9UKA4	1901 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	PHF20L1	A8MW92	1017 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	TBC1D12	O60347	775 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	CETP	P11597	493 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	TGFBRAP1	Q8WUH2	860 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	R3HDML	Q9H3Y0	253 aa		31.87	■■■□□ 2.69
LIMD2-208	ENST00000579814	SMARCA5	O60264	1052 aa	Predicted RBP	31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	ATP5J	P18859	108 aa		31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	ABHD8	Q96I13	439 aa		31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	MCOLN1	Q9GZU1	580 aa		31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	DHX36	Q9H2U1	1008 aa	Known RBP	31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	PICK1	Q9NRD5	415 aa		31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	PCDHB15	Q9Y5E8	787 aa		31.86	■■■□□ 2.69
LIMD2-208	ENST00000579814	GOLIM4	O00461	696 aa		31.85	■■■□□ 2.69
LIMD2-208	ENST00000579814	SCYL3	Q8IZE3	742 aa		31.85	■■■□□ 2.69
LIMD2-208	ENST00000579814	CRBN	Q96SW2	442 aa		31.85	■■■□□ 2.69
LIMD2-208	ENST00000579814	BOLA2	Q9H3K6	86 aa		31.85	■■■□□ 2.69
LIMD2-208	ENST00000579814	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	31.85	■■■□□ 2.69
LIMD2-208	ENST00000579814	CTNND1	O60716	968 aa	Known RBP	31.84	■■■□□ 2.69
LIMD2-208	ENST00000579814	FKTN	O75072	461 aa		31.84	■■■□□ 2.69
LIMD2-208	ENST00000579814	DYNLL1	P63167	89 aa	Known RBP	31.84	■■■□□ 2.69
LIMD2-208	ENST00000579814	MAPKAPK5	Q8IW41	473 aa		31.84	■■■□□ 2.69
LIMD2-208	ENST00000579814	MIGA1	Q8NAN2	632 aa		31.84	■■■□□ 2.69
LIMD2-208	ENST00000579814	CTU1	Q7Z7A3	348 aa	Known RBP	31.83	■■■□□ 2.69
LIMD2-208	ENST00000579814	PI4KB	Q9UBF8	816 aa		31.83	■■■□□ 2.69
LIMD2-208	ENST00000579814	SLURP2	P0DP57	97 aa		31.82	■■■□□ 2.68
LIMD2-208	ENST00000579814	SLC9C2	Q5TAH2	1124 aa		31.82	■■■□□ 2.68
LIMD2-208	ENST00000579814	COL2A1	P02458	1487 aa	Predicted RBP	31.82	■■■□□ 2.68
LIMD2-208	ENST00000579814	CASP8AP2	Q9UKL3	1982 aa		31.81	■■■□□ 2.68
LIMD2-208	ENST00000579814	CRHR2	Q13324	411 aa		31.81	■■■□□ 2.68
LIMD2-208	ENST00000579814	PAG1	Q9NWQ8	432 aa		31.81	■■■□□ 2.68
LIMD2-208	ENST00000579814	FLT1	P17948	1338 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	FAM43A	Q8N2R8	423 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	HAUS7	Q99871	368 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	ZFYVE28	Q9HCC9	887 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	HERC5	Q9UII4	1024 aa	Known RBP	31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	KCNH4	Q9UQ05	1017 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	ZHX2	Q9Y6X8	837 aa		31.8	■■■□□ 2.68
LIMD2-208	ENST00000579814	OTOF	Q9HC10	1997 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	CXCL11	O14625	94 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	PDE6A	P16499	860 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	PTPRA	P18433	802 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	USP5	P45974	858 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	ZCCHC17	Q9NP64	241 aa	Known RBP	31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	AK9	Q5TCS8	1911 aa		31.79	■■■□□ 2.68
LIMD2-208	ENST00000579814	TAF1C	Q15572	869 aa	Predicted RBP	31.78	■■■□□ 2.68
LIMD2-208	ENST00000579814	FOXP4	Q8IVH2	680 aa	Predicted RBP	31.78	■■■□□ 2.68
LIMD2-208	ENST00000579814	EDC3	Q96F86	508 aa	Known RBP	31.78	■■■□□ 2.68
LIMD2-208	ENST00000579814	GPATCH3	Q96I76	525 aa		31.78	■■■□□ 2.68
LIMD2-208	ENST00000579814	ECHDC1	Q9NTX5	307 aa		31.78	■■■□□ 2.68
LIMD2-208	ENST00000579814	FAM196B	A6NMK8	535 aa		31.77	■■■□□ 2.68

Retrieved 100 of 20,778 RNA–protein pairs in 15 ms