RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 ZNF384Q8TF68 577 aa13.23□□□□□ -0.29
CSNK1D-210ENST00000579308 AFG3L2Q9Y4W6 797 aa13.23□□□□□ -0.29
CSNK1D-210ENST00000579308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
CSNK1D-210ENST00000579308 A0A0G2JLL6 359 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 DDTLA6NHG4 134 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 HOXD10P28358 340 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 TFCP2Q12800 502 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 MTFR1Q15390 333 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 PRRT2Q7Z6L0 340 aaPredicted RBP13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 SCYL3Q8IZE3 742 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 XAGE2Q96GT9 111 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 DDX4Q9NQI0 724 aaKnown RBP13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 ZHX2Q9Y6X8 837 aa13.22□□□□□ -0.29
CSNK1D-210ENST00000579308 GPR75-ASB3A0A0A6YYF3 556 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 NPM3O75607 178 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 FMNL1O95466 1100 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SLURP2P0DP57 97 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 CYP2C8P10632 490 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 RHBDL3P58872 404 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 FASTKD5Q7L8L6 764 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SLF2Q8IX21 1173 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SHISA4Q96DD7 197 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 PARK7Q99497 189 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 ABCF2Q9UG63 623 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 AKAP2Q9Y2D5 859 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 SLC45A1Q9Y2W3 748 aa13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-210ENST00000579308 A0A1B0GUL7 405 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 TBC1D12O60347 775 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 GNAI3P08754 354 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 GRK4P32298 578 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 BTDP43251 543 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 MECOMQ03112 1051 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 DZIP1Q86YF9 867 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 PICK1Q9NRD5 415 aa13.2□□□□□ -0.3
CSNK1D-210ENST00000579308 MROH7-TTC4A0A0A0MT08 1334 aa13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 RAET1EQ8TD07 263 aa13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 COLQQ9Y215 455 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-210ENST00000579308 MYPNQ86TC9 1320 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 H0YGN5 161 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 GJB1P08034 283 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 GJA8P48165 433 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 FCGRTP55899 365 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 PRKCZQ05513 592 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 ERICH6Q7L0X2 663 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 NSUN4Q96CB9 384 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 GABRQQ9UN88 632 aa13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-210ENST00000579308 CCER2I3L3R5 266 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 CCL5P13501 91 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 TRIM27P14373 513 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 PICALMQ13492 652 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 PI16Q6UXB8 463 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 TBC1D9Q6ZT07 1266 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 SZT2Q5T011 3432 aa13.17□□□□□ -0.3
CSNK1D-210ENST00000579308 ZSWIM8A7E2V4 1837 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 PNMA6EA0A0J9YXQ4 647 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 IPO8O15397 1037 aaKnown RBP13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 GNAI2P04899 355 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 SLAIN1Q8ND83 568 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 AGTPBP1Q9UPW5 1226 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 TNNQ9UQP3 1299 aa13.16□□□□□ -0.3
CSNK1D-210ENST00000579308 CEP290O15078 2479 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 TRIM75PA6NK02 468 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 BCAR3O75815 825 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 LDHCP07864 332 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 FLT3LGP49771 235 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 GSTO1P78417 241 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 IRF5Q13568 498 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 RRP1BQ14684 758 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 TREML2Q5T2D2 321 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 CCDC84Q86UT8 332 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 PXYLP1Q8TE99 480 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 RNF208Q9H0X6 261 aa13.15□□□□□ -0.3
CSNK1D-210ENST00000579308 ADCY3O60266 1144 aa13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 MCAMP43121 646 aa13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 UBXN2AP68543 259 aa13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 OSBPL5Q9H0X9 879 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 UNC93B1Q9H1C4 597 aa13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 BIN2Q9UBW5 565 aaPredicted RBP13.14□□□□□ -0.31
CSNK1D-210ENST00000579308 FAM196BA6NMK8 535 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms