RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 SCYL3Q8IZE3 742 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 COA7Q96BR5 231 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 GDF15Q99988 308 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 BICC1Q9H694 974 aaKnown RBP11.45□□□□□ -0.58
PTPRM-210ENST00000578916 USP40Q9NVE5 1235 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 ZMYND8Q9ULU4 1186 aaPredicted RBP11.45□□□□□ -0.58
PTPRM-210ENST00000578916 SLC45A1Q9Y2W3 748 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 DAGLAQ9Y4D2 1042 aa11.45□□□□□ -0.58
PTPRM-210ENST00000578916 NBPF7P0C2Y1 421 aaPredicted RBP11.44□□□□□ -0.58
PTPRM-210ENST00000578916 PUM3Q15397 648 aaKnown RBP11.44□□□□□ -0.58
PTPRM-210ENST00000578916 PPP4R3CPQ6ZMV5 832 aa11.44□□□□□ -0.58
PTPRM-210ENST00000578916 VGLL2Q8N8G2 317 aa11.44□□□□□ -0.58
PTPRM-210ENST00000578916 DIS3LQ8TF46 1054 aaKnown RBP11.44□□□□□ -0.58
PTPRM-210ENST00000578916 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRM-210ENST00000578916 FAM198AQ9UFP1 575 aa11.44□□□□□ -0.58
PTPRM-210ENST00000578916 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
PTPRM-210ENST00000578916 KIF16BQ96L93 1317 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 LAMA3Q16787 3333 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 PHF20L1A8MW92 1017 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 SLC5A1P13866 664 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 PTPRAP18433 802 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 DIXDC1Q155Q3 683 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 RABL6Q3YEC7 729 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-210ENST00000578916 Q7L0L9 218 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 ZFPM1Q8IX07 1006 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 ANKRD13CQ8N6S4 541 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 ANKLE1Q8NAG6 615 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 SPINK5Q9NQ38 1064 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-210ENST00000578916 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
PTPRM-210ENST00000578916 AFG3L2Q9Y4W6 797 aa11.43□□□□□ -0.58
PTPRM-210ENST00000578916 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
PTPRM-210ENST00000578916 TRIM75PA6NK02 468 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 LDHBP07195 334 aaKnown RBP11.42□□□□□ -0.58
PTPRM-210ENST00000578916 FGFR2P21802 821 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 TMEM132AQ24JP5 1023 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 LRIT3Q3SXY7 679 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 WDR63Q8IWG1 891 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 ZSCAN29Q8IWY8 852 aaPredicted RBP11.42□□□□□ -0.58
PTPRM-210ENST00000578916 TDHQ8IZJ6 230 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 ANKRD44Q8N8A2 993 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 KLHDC4Q8TBB5 520 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
PTPRM-210ENST00000578916 UTYO14607 1347 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 ENTPD3O75355 529 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 HMGCRP04035 888 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 SYN1P17600 705 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 PRDX5P30044 214 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 MAGEA10P43363 369 aaPredicted RBP11.41□□□□□ -0.58
PTPRM-210ENST00000578916 RGS3P49796 1198 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 LPIN2Q92539 896 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 UBE2OQ9C0C9 1292 aaKnown RBP11.41□□□□□ -0.58
PTPRM-210ENST00000578916 MTMR10Q9NXD2 777 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 PNMA3Q9UL41 463 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 AGTPBP1Q9UPW5 1226 aa11.41□□□□□ -0.58
PTPRM-210ENST00000578916 RPTORQ8N122 1335 aa11.4□□□□□ -0.58
PTPRM-210ENST00000578916 CTNND1O60716 968 aaKnown RBP11.4□□□□□ -0.58
PTPRM-210ENST00000578916 FAM110CQ1W6H9 321 aa11.4□□□□□ -0.58
PTPRM-210ENST00000578916 CCDC184Q52MB2 194 aa11.4□□□□□ -0.58
PTPRM-210ENST00000578916 C11orf49Q9H6J7 331 aa11.4□□□□□ -0.58
PTPRM-210ENST00000578916 HMX1Q9NP08 348 aaPredicted RBP11.4□□□□□ -0.58
PTPRM-210ENST00000578916 GNL3LQ9NVN8 582 aaKnown RBP11.4□□□□□ -0.58
PTPRM-210ENST00000578916 ATRNL1Q5VV63 1379 aa11.4□□□□□ -0.59
PTPRM-210ENST00000578916 CACNA1FO60840 1977 aa11.39□□□□□ -0.59
PTPRM-210ENST00000578916 EYA2O00167 538 aa11.39□□□□□ -0.59
PTPRM-210ENST00000578916 COL25A1Q9BXS0 654 aaPredicted RBP11.39□□□□□ -0.59
PTPRM-210ENST00000578916 IDI2Q9BXS1 227 aa11.39□□□□□ -0.59
PTPRM-210ENST00000578916 MGAMO43451 1857 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 GCLCP48506 637 aaPredicted RBP11.38□□□□□ -0.59
PTPRM-210ENST00000578916 MAP3K10Q02779 954 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
PTPRM-210ENST00000578916 TREML2Q5T2D2 321 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 SH3BP5LQ7L8J4 393 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
PTPRM-210ENST00000578916 PROCA1Q8NCQ7 364 aaPredicted RBP11.38□□□□□ -0.59
PTPRM-210ENST00000578916 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.38□□□□□ -0.59
PTPRM-210ENST00000578916 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 CUL9Q8IWT3 2517 aa11.38□□□□□ -0.59
PTPRM-210ENST00000578916 SALL1Q9NSC2 1324 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 DDTLA6NHG4 134 aaPredicted RBP11.37□□□□□ -0.59
PTPRM-210ENST00000578916 SLURP2P0DP57 97 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 TRIM32Q13049 653 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 PICALMQ13492 652 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 DZIP1Q86YF9 867 aaKnown RBP11.37□□□□□ -0.59
PTPRM-210ENST00000578916 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRM-210ENST00000578916 SLF2Q8IX21 1173 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 ZGPATQ8N5A5 531 aaKnown RBP11.37□□□□□ -0.59
PTPRM-210ENST00000578916 GJD2Q9UKL4 321 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 OGDHLQ9ULD0 1010 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 AK9Q5TCS8 1911 aa11.37□□□□□ -0.59
PTPRM-210ENST00000578916 SEMA3EO15041 775 aa11.36□□□□□ -0.59
PTPRM-210ENST00000578916 CYP2B6P20813 491 aa11.36□□□□□ -0.59
PTPRM-210ENST00000578916 SPP2Q13103 211 aa11.36□□□□□ -0.59
PTPRM-210ENST00000578916 ATP2B3Q16720 1220 aa11.36□□□□□ -0.59
PTPRM-210ENST00000578916 CEP126Q9P2H0 1117 aa11.36□□□□□ -0.59
PTPRM-210ENST00000578916 GAKO14976 1311 aa11.35□□□□□ -0.59
PTPRM-210ENST00000578916 TBC1D12O60347 775 aa11.35□□□□□ -0.59
PTPRM-210ENST00000578916 BTDP43251 543 aa11.35□□□□□ -0.59
PTPRM-210ENST00000578916 PHKA1P46020 1223 aa11.35□□□□□ -0.59
PTPRM-210ENST00000578916 RFX5P48382 616 aaPredicted RBP11.35□□□□□ -0.59
PTPRM-210ENST00000578916 ATG9AQ7Z3C6 839 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms