RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 POTEB2H3BUK9 544 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 PFKFB2O60825 505 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 TBC1D8BQ0IIM8 1120 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 FAM47AQ5JRC9 791 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 LDHCP07864 332 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 POSTNQ15063 836 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 EPHA10Q5JZY3 1008 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 ATRIPQ8WXE1 791 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 CNKSR2Q8WXI2 1034 aa13.62□□□□□ -0.23
ERBB2-206ENST00000578373 AATFQ9NY61 560 aaKnown RBP eCLIP13.62□□□□□ -0.23
ERBB2-206ENST00000578373 GSTTP1A0A1W2PQM5 241 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 BMP15O95972 392 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 CHGBP05060 677 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 DDB1Q16531 1140 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 HAUS7Q99871 368 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 KRT86O43790 486 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 RAD51AP2Q09MP3 1159 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 SEPT7Q16181 437 aaKnown RBP13.61□□□□□ -0.23
ERBB2-206ENST00000578373 CEP112Q8N8E3 955 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 TMEM87BQ96K49 555 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 SSH2Q76I76 1423 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 DEXIO95424 95 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 RFC4P35249 363 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 SF3A3Q12874 501 aaKnown RBP eCLIP13.61□□□□□ -0.232e-6■■■□□ 15.5
ERBB2-206ENST00000578373 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-206ENST00000578373 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
ERBB2-206ENST00000578373 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 SH3TC1Q8TE82 1336 aa13.61□□□□□ -0.23
ERBB2-206ENST00000578373 PHKG2P15735 406 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 FAM135BQ49AJ0 1406 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 NSUN7Q8NE18 718 aaKnown RBP13.6□□□□□ -0.23
ERBB2-206ENST00000578373 FBXO18Q8NFZ0 1043 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 CUTAO60888 179 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 MCM3P25205 808 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 CHMP4BP1P59074 171 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 ZNF622Q969S3 477 aaKnown RBP eCLIP13.6□□□□□ -0.23
ERBB2-206ENST00000578373 PCDHA5Q9Y5H7 936 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 NECTIN1Q15223 517 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 FAM114A1Q8IWE2 563 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 SNAP23O00161 211 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 TACC1O75410 805 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 PUM3Q15397 648 aaKnown RBP13.6□□□□□ -0.23
ERBB2-206ENST00000578373 GRAMD1CQ8IYS0 662 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 SAMM50Q9Y512 469 aa13.6□□□□□ -0.23
ERBB2-206ENST00000578373 KDRP35968 1356 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 CNGA4Q8IV77 575 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 SMIM23A6NLE4 172 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 ARHGAP6O43182 974 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 COPRSQ9NQ92 184 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 RIMBP2O15034 1052 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 PHKA1P46020 1223 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 KRBA2Q6ZNG9 492 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 SYCP3Q8IZU3 236 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 SPATA5Q8NB90 893 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 SYNRGQ9UMZ2 1314 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
ERBB2-206ENST00000578373 BCAMP50895 628 aa13.58□□□□□ -0.23
ERBB2-206ENST00000578373 TTC38Q5R3I4 469 aa13.58□□□□□ -0.23
ERBB2-206ENST00000578373 ZNF274Q96GC6 653 aaPredicted RBP13.58□□□□□ -0.23
ERBB2-206ENST00000578373 PDE6AP16499 860 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 GNAT2P19087 354 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 TXKP42681 527 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PDE4DQ08499 809 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 WWC2Q6AWC2 1192 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
ERBB2-206ENST00000578373 NAA15Q9BXJ9 866 aaKnown RBP13.58□□□□□ -0.24
ERBB2-206ENST00000578373 IL25Q9H293 177 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 ADCY9O60503 1353 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PCDH11XQ9BZA7 1347 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PCDH11YQ9BZA8 1340 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 CALML3P27482 149 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 MNAT1P51948 309 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 TCIRG1Q13488 830 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PLS1Q14651 629 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 DYMQ7RTS9 669 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 OSBP2Q969R2 916 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 ATP1A3P13637 1013 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PTPN12Q05209 780 aaKnown RBP13.58□□□□□ -0.24
ERBB2-206ENST00000578373 MLKLQ8NB16 471 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 GREM2Q9H772 168 aa13.58□□□□□ -0.24
ERBB2-206ENST00000578373 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 USP17L21D6R901 530 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 GYG1P46976 350 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 AKNAD1Q5T1N1 836 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CSGALNACT2Q8N6G5 542 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 EHBP1Q8NDI1 1231 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 TMOD2Q9NZR1 351 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 MAST3O60307 1309 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 HSF2BPO75031 334 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CALM1P0DP23 149 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CALM2P0DP24 149 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CALM3P0DP25 149 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 PTPROQ16827 1216 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 SPECC1LQ69YQ0 1117 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 PYM1Q9BRP8 204 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms