RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 TCP10L2B9ZVM9 353 aa16.6■□□□□ 0.25
LINC01543-201ENST00000578367 CHGBP05060 677 aa16.6■□□□□ 0.25
LINC01543-201ENST00000578367 SLFNL1Q499Z3 407 aa16.6■□□□□ 0.25
LINC01543-201ENST00000578367 SEC62Q99442 399 aaKnown RBP16.6■□□□□ 0.25
LINC01543-201ENST00000578367 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
LINC01543-201ENST00000578367 DCP1AQ9NPI6 582 aaPredicted RBP16.6■□□□□ 0.25
LINC01543-201ENST00000578367 FLT1P17948 1338 aa16.6■□□□□ 0.25
LINC01543-201ENST00000578367 MYH2Q9UKX2 1941 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 GSG1L2A8MUP6 293 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 NFIAQ12857 509 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 SBK1Q52WX2 424 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 TTC6Q86TZ1 520 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 ARPP21Q9UBL0 812 aaPredicted RBP16.59■□□□□ 0.25
LINC01543-201ENST00000578367 ASTN2O75129 1339 aaPredicted RBP16.59■□□□□ 0.25
LINC01543-201ENST00000578367 CNTNAP1P78357 1384 aa16.59■□□□□ 0.25
LINC01543-201ENST00000578367 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 HSPD1P10809 573 aaKnown RBP16.58■□□□□ 0.24
LINC01543-201ENST00000578367 NF2P35240 595 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 NT5C2P49902 561 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 KIAA1211Q6ZU35 1233 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 ZNF589Q86UQ0 364 aaPredicted RBP16.58■□□□□ 0.24
LINC01543-201ENST00000578367 FOXP4Q8IVH2 680 aaPredicted RBP16.58■□□□□ 0.24
LINC01543-201ENST00000578367 IFNL3Q8IZI9 196 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 EHD4Q9H223 541 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 DDX4Q9NQI0 724 aaKnown RBP16.58■□□□□ 0.24
LINC01543-201ENST00000578367 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 CTNNA3Q9UI47 895 aa16.58■□□□□ 0.24
LINC01543-201ENST00000578367 UNCXA6NJT0 531 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 TBC1D12O60347 775 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 REC8O95072 547 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 HLA-DOAP06340 250 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 CACNB3P54284 484 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 FKBP1BP68106 108 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 MAP3K10Q02779 954 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 PICALMQ13492 652 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 MAP1SQ66K74 1059 aaPredicted RBP16.57■□□□□ 0.24
LINC01543-201ENST00000578367 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
LINC01543-201ENST00000578367 MAPKAPK5Q8IW41 473 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 TEPSINQ96N21 525 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 MCM9Q9NXL9 1143 aa16.57■□□□□ 0.24
LINC01543-201ENST00000578367 PRKAB2O43741 272 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
LINC01543-201ENST00000578367 APPP05067 770 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 SDR42E1Q8WUS8 393 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 TMEM39BQ9GZU3 492 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 NAPBQ9H115 298 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 HERC5Q9UII4 1024 aaKnown RBP16.56■□□□□ 0.24
LINC01543-201ENST00000578367 MYH7P12883 1935 aa16.56■□□□□ 0.24
LINC01543-201ENST00000578367 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
LINC01543-201ENST00000578367 TDO2P48775 406 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 TCP10Q12799 353 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 CCDC129Q6ZRS4 1044 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 ZSCAN29Q8IWY8 852 aaPredicted RBP16.55■□□□□ 0.24
LINC01543-201ENST00000578367 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 CSRNP1Q96S65 589 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
LINC01543-201ENST00000578367 ZNF287Q9HBT7 754 aa16.55■□□□□ 0.24
LINC01543-201ENST00000578367 EPB41L4AQ9HCS5 686 aaPredicted RBP16.55■□□□□ 0.24
LINC01543-201ENST00000578367 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
LINC01543-201ENST00000578367 MYO5AQ9Y4I1 1855 aaKnown RBP16.54■□□□□ 0.24
LINC01543-201ENST00000578367 FOXP2O15409 715 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 PPP1R12BO60237 982 aaPredicted RBP16.54■□□□□ 0.24
LINC01543-201ENST00000578367 FGAP02671 866 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 SLC3A2P08195 630 aaKnown RBP16.54■□□□□ 0.24
LINC01543-201ENST00000578367 PCP11498 1178 aaKnown RBP16.54■□□□□ 0.24
LINC01543-201ENST00000578367 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 CTR9Q6PD62 1173 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 SH3BP5LQ7L8J4 393 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 SWAP70Q9UH65 585 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 ANAPC4Q9UJX5 808 aa16.54■□□□□ 0.24
LINC01543-201ENST00000578367 PASKQ96RG2 1323 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 DDTLA6NHG4 134 aaPredicted RBP16.53■□□□□ 0.24
LINC01543-201ENST00000578367 USP17L12C9JPN9 530 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 ADM5C9JUS6 153 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 USP17L21D6R901 530 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 ZFPM1Q8IX07 1006 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 IL25Q9H293 177 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 GINM1Q9NU53 330 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 SERPINB13Q9UIV8 391 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 PALD1Q9ULE6 856 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 ECM29Q5VYK3 1845 aa16.53■□□□□ 0.24
LINC01543-201ENST00000578367 ROBO3Q96MS0 1386 aa16.52■□□□□ 0.24
LINC01543-201ENST00000578367 MAP3K11Q16584 847 aa16.52■□□□□ 0.24
LINC01543-201ENST00000578367 NBPF12Q5TAG4 269 aaPredicted RBP16.52■□□□□ 0.24
LINC01543-201ENST00000578367 LSG1Q9H089 658 aaKnown RBP16.52■□□□□ 0.24
LINC01543-201ENST00000578367 ANO2Q9NQ90 1003 aa16.52■□□□□ 0.24
LINC01543-201ENST00000578367 GABPAQ06546 454 aa16.51■□□□□ 0.23
LINC01543-201ENST00000578367 IMMTQ16891 758 aaKnown RBP16.51■□□□□ 0.23
LINC01543-201ENST00000578367 ARMC9Q7Z3E5 817 aa16.51■□□□□ 0.23
LINC01543-201ENST00000578367 TRIM34Q9BYJ4 488 aa16.51■□□□□ 0.23
LINC01543-201ENST00000578367 ZNF341Q9BYN7 854 aa16.51■□□□□ 0.23
LINC01543-201ENST00000578367 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
LINC01543-201ENST00000578367 ZNF213O14771 459 aa16.5■□□□□ 0.23
LINC01543-201ENST00000578367 IREB2P48200 963 aaKnown RBP16.5■□□□□ 0.23
LINC01543-201ENST00000578367 PPARAQ07869 468 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms