RNA–Protein interactions for RNA: ENST00000578315.1

UPF3AP2-202, Transcript of UPF3A pseudogene 2, humanhuman

TSL 5 BASIC

Gene UPF3AP2, Length 730 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-202ENST00000578315 PRRT2Q7Z6L0 340 aaPredicted RBP16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 SCYL3Q8IZE3 742 aa16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 TAOK2Q9UL54 1235 aa16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 NR2E3Q9Y5X4 410 aa16.97■□□□□ 0.31
UPF3AP2-202ENST00000578315 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 SGPL1O95470 568 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 PTPRAP18433 802 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 SH3BP5LQ7L8J4 393 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 CCDC84Q86UT8 332 aaPredicted RBP16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 CEP126Q9P2H0 1117 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 AFG3L2Q9Y4W6 797 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 LRRFIP2Q9Y608 721 aaKnown RBP16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 ATRNL1Q5VV63 1379 aa16.96■□□□□ 0.31
UPF3AP2-202ENST00000578315 DOCK2Q92608 1830 aa16.96■□□□□ 0.3
UPF3AP2-202ENST00000578315 TRIM75PA6NK02 468 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 TFRCP02786 760 aaKnown RBP16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 INHAP05111 366 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 PICALMQ13492 652 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 DEFB118Q96PH6 123 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 PRO3102Q9H379 93 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 DENND2AQ9ULE3 1009 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 ZNF521Q96K83 1311 aa16.95■□□□□ 0.3
UPF3AP2-202ENST00000578315 DDTLA6NHG4 134 aaPredicted RBP16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 ENTPD3O75355 529 aa16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 ADORA1P30542 326 aa16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 SMCR8Q8TEV9 937 aaPredicted RBP16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 IDI2Q9BXS1 227 aa16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 PA2G4Q9UQ80 394 aaKnown RBP16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 SALL1Q9NSC2 1324 aa16.94■□□□□ 0.3
UPF3AP2-202ENST00000578315 EVI5O60447 810 aa16.93■□□□□ 0.3
UPF3AP2-202ENST00000578315 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
UPF3AP2-202ENST00000578315 DDX4Q9NQI0 724 aaKnown RBP16.93■□□□□ 0.3
UPF3AP2-202ENST00000578315 ABCF2Q9UG63 623 aa16.93■□□□□ 0.3
UPF3AP2-202ENST00000578315 MYH2Q9UKX2 1941 aa16.93■□□□□ 0.3
UPF3AP2-202ENST00000578315 CIAO1O76071 339 aa16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 UBTFL1P0CB47 393 aaPredicted RBP16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 ANKRD13CQ8N6S4 541 aa16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 GAKO14976 1311 aa16.92■□□□□ 0.3
UPF3AP2-202ENST00000578315 FAM196BA6NMK8 535 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 SOX1O00570 391 aaPredicted RBP16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 SEMA3EO15041 775 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 CTNND1O60716 968 aaKnown RBP16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 BTDP43251 543 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 TREML2Q5T2D2 321 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 PXYLP1Q8TE99 480 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 PAWRQ96IZ0 340 aaKnown RBP16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 SLC45A1Q9Y2W3 748 aa16.91■□□□□ 0.3
UPF3AP2-202ENST00000578315 DOCK1Q14185 1865 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 RFX7Q2KHR2 1363 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 IL15P40933 162 aaPredicted RBP16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 TIMM10P62072 90 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 MAP3K10Q02779 954 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 IRF5Q13568 498 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 ZGPATQ8N5A5 531 aaKnown RBP16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 SLC17A8Q8NDX2 589 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 COA7Q96BR5 231 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 LRCH3Q96II8 777 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 SMC4Q9NTJ3 1288 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 FBXO3Q9UK99 471 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 AGTPBP1Q9UPW5 1226 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 PHIPQ8WWQ0 1821 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 PTPRFP10586 1907 aa16.9■□□□□ 0.3
UPF3AP2-202ENST00000578315 E9PSI1 815 aa16.89■□□□□ 0.29
UPF3AP2-202ENST00000578315 DIS3LQ8TF46 1054 aaKnown RBP16.89■□□□□ 0.29
UPF3AP2-202ENST00000578315 PAK6Q9NQU5 681 aaPredicted RBP16.89■□□□□ 0.29
UPF3AP2-202ENST00000578315 SLF2Q8IX21 1173 aa16.88■□□□□ 0.29
UPF3AP2-202ENST00000578315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.88■□□□□ 0.29
UPF3AP2-202ENST00000578315 MROH7-TTC4A0A0A0MT08 1334 aa16.88■□□□□ 0.29
UPF3AP2-202ENST00000578315 DLL1O00548 723 aa16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 MECOMQ03112 1051 aa16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 SPP2Q13103 211 aa16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 SPTY2D1Q68D10 685 aaPredicted RBP16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 CRISPLD2Q9H0B8 497 aa16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.87■□□□□ 0.29
UPF3AP2-202ENST00000578315 HMGCS2P54868 508 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 RHBDL3P58872 404 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 SLFN5Q08AF3 891 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 TRIM32Q13049 653 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 FAM110CQ1W6H9 321 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 ALDH1L2Q3SY69 923 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 NECAB2Q7Z6G3 386 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 C7orf61Q8IZ16 206 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 ZNF384Q8TF68 577 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 FAM163AQ96GL9 167 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 XAGE2Q96GT9 111 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 COPRSQ9NQ92 184 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 PNMA3Q9UL41 463 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 ZMYND8Q9ULU4 1186 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 ALPK3Q96L96 1907 aa16.86■□□□□ 0.29
UPF3AP2-202ENST00000578315 GPR75-ASB3A0A0A6YYF3 556 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 A0A1B0GUL7 405 aa16.85■□□□□ 0.29
UPF3AP2-202ENST00000578315 A0A1W2PPC1 479 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms