RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ZNRF3Q9ULT6 936 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 PSME4Q14997 1843 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 COL4A5P29400 1685 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 PRC1O43663 620 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 KIAA0825Q8IV33 1275 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 AMOTL1Q8IY63 956 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 MCM9Q9NXL9 1143 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 CHMP5Q9NZZ3 219 aa21.92■■□□□ 1.1
PRKCA-203ENST00000578063 SLC3A2P08195 630 aaKnown RBP21.91■■□□□ 1.1
PRKCA-203ENST00000578063 CRKP46108 304 aa21.91■■□□□ 1.1
PRKCA-203ENST00000578063 SCNN1DP51172 638 aa21.91■■□□□ 1.1
PRKCA-203ENST00000578063 TGFBRAP1Q8WUH2 860 aa21.91■■□□□ 1.1
PRKCA-203ENST00000578063 BRF1Q92994 677 aa21.91■■□□□ 1.1
PRKCA-203ENST00000578063 LARP6Q9BRS8 491 aaKnown RBP21.91■■□□□ 1.1
PRKCA-203ENST00000578063 LAMB1P07942 1786 aa21.91■■□□□ 1.1
PRKCA-203ENST00000578063 B4E1Z4 1266 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 ANTXR2P58335 489 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 ME3Q16798 604 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 RSBN1LQ6PCB5 846 aaPredicted RBP21.9■■□□□ 1.1
PRKCA-203ENST00000578063 ZDHHC15Q96MV8 337 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 LRRC2Q9BYS8 371 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 SERPINA10Q9UK55 444 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
PRKCA-203ENST00000578063 NAV1Q8NEY1 1877 aa21.89■■□□□ 1.1
PRKCA-203ENST00000578063 LARGE1O95461 756 aa21.89■■□□□ 1.1
PRKCA-203ENST00000578063 JDP2Q8WYK2 163 aa21.89■■□□□ 1.1
PRKCA-203ENST00000578063 FHDC1Q9C0D6 1143 aaPredicted RBP21.89■■□□□ 1.1
PRKCA-203ENST00000578063 VIL1P09327 827 aaKnown RBP21.89■■□□□ 1.09
PRKCA-203ENST00000578063 FGRP09769 529 aa21.89■■□□□ 1.09
PRKCA-203ENST00000578063 CHST3Q7LGC8 479 aa21.89■■□□□ 1.09
PRKCA-203ENST00000578063 TMEM87BQ96K49 555 aa21.89■■□□□ 1.09
PRKCA-203ENST00000578063 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.89■■□□□ 1.09
PRKCA-203ENST00000578063 FLT1P17948 1338 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 BAZ2AQ9UIF9 1905 aaKnown RBP21.88■■□□□ 1.09
PRKCA-203ENST00000578063 CYP2D7A0A087X1C5 515 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 NT5C2P49902 561 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 C12orf60Q5U649 245 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 MAPKAPK5Q8IW41 473 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 MTA3Q9BTC8 594 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 TOMM22Q9NS69 142 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 TACC3Q9Y6A5 838 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 ROBO3Q96MS0 1386 aa21.88■■□□□ 1.09
PRKCA-203ENST00000578063 PSMD14O00487 310 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 KDM4AO75164 1064 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 RAD17O75943 681 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 USP17L8P0C7I0 530 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
PRKCA-203ENST00000578063 CYB5R4Q7L1T6 521 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 ESR2Q92731 530 aa21.87■■□□□ 1.09
PRKCA-203ENST00000578063 DDX60LQ5H9U9 1706 aaKnown RBP21.87■■□□□ 1.09
PRKCA-203ENST00000578063 EVCP57679 992 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 ANGEL1Q9UNK9 670 aaKnown RBP21.86■■□□□ 1.09
PRKCA-203ENST00000578063 ORC4O43929 436 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 PDE4BQ07343 736 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 RRP12Q5JTH9 1297 aaKnown RBP21.86■■□□□ 1.09
PRKCA-203ENST00000578063 CCDC83Q8IWF9 413 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 INCENPQ9NQS7 918 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 USP40Q9NVE5 1235 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 ZSWIM5Q9P217 1185 aa21.86■■□□□ 1.09
PRKCA-203ENST00000578063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.86■■□□□ 1.09
PRKCA-203ENST00000578063 SH2B2O14492 632 aaPredicted RBP21.85■■□□□ 1.09
PRKCA-203ENST00000578063 CYP2D6P10635 497 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 APOBRQ0VD83 1088 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 SART3Q15020 963 aaKnown RBP21.85■■□□□ 1.09
PRKCA-203ENST00000578063 CDC42EP5Q6NZY7 148 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 AGBL3Q8NEM8 1001 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 GTF3C6Q969F1 213 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 ZNF274Q96GC6 653 aaPredicted RBP21.85■■□□□ 1.09
PRKCA-203ENST00000578063 GMLQ99445 158 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 HDAC9Q9UKV0 1011 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 CDK5RAP2Q96SN8 1893 aa21.85■■□□□ 1.09
PRKCA-203ENST00000578063 FOCADQ5VW36 1801 aa21.84■■□□□ 1.09
PRKCA-203ENST00000578063 ADAMTSL1Q8N6G6 1762 aa21.84■■□□□ 1.09
PRKCA-203ENST00000578063 WDHD1O75717 1129 aaPredicted RBP21.84■■□□□ 1.09
PRKCA-203ENST00000578063 POLR3DP05423 398 aaPredicted RBP21.84■■□□□ 1.09
PRKCA-203ENST00000578063 RBM5P52756 815 aaKnown RBP eCLIP21.84■■□□□ 1.09
PRKCA-203ENST00000578063 STK11IPQ8N1F8 1099 aa21.84■■□□□ 1.09
PRKCA-203ENST00000578063 CHMP4CQ96CF2 233 aa21.84■■□□□ 1.09
PRKCA-203ENST00000578063 PFKFB2O60825 505 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 CXCL9Q07325 125 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 ST3GAL1Q11201 340 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 CIAPIN1Q6FI81 312 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 NECAB1Q8N987 351 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 NKX2-3Q8TAU0 364 aa21.83■■□□□ 1.09
PRKCA-203ENST00000578063 SMIM22K7EJ46 135 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 LIFRP42702 1097 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 RASSF7Q02833 373 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 OGFOD1Q8N543 542 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 ZNF287Q9HBT7 754 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 SAP30BPQ9UHR5 308 aaKnown RBP21.83■■□□□ 1.08
PRKCA-203ENST00000578063 SMC3Q9UQE7 1217 aa21.83■■□□□ 1.08
PRKCA-203ENST00000578063 IFIT3O14879 490 aaKnown RBP21.82■■□□□ 1.08
PRKCA-203ENST00000578063 NUCB2P80303 420 aa21.82■■□□□ 1.08
PRKCA-203ENST00000578063 TNIP1Q15025 636 aa21.82■■□□□ 1.08
PRKCA-203ENST00000578063 CFAP100Q494V2 611 aa21.82■■□□□ 1.08
PRKCA-203ENST00000578063 TMEM67Q5HYA8 995 aa21.82■■□□□ 1.08
PRKCA-203ENST00000578063 IGDCC4Q8TDY8 1250 aa21.82■■□□□ 1.08
PRKCA-203ENST00000578063 GPHNQ9NQX3 736 aaPredicted RBP21.82■■□□□ 1.08
PRKCA-203ENST00000578063 ERICH2A1L162 156 aa21.81■■□□□ 1.08
PRKCA-203ENST00000578063 STK3Q13188 491 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms