RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 LDHBP07195 334 aaKnown RBP13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 CHMLP26374 656 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 PRDX5P30044 214 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RILPL2Q969X0 211 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 LRP2BPQ9P2M1 347 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 CHAF1AQ13111 956 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GRIK5Q16478 980 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 SLC9C2Q5TAH2 1124 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 HHIPL2Q6UWX4 724 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 HELLSQ9NRZ9 838 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ABCF2Q9UG63 623 aa13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ZBTB12Q9Y330 459 aaPredicted RBP13.43□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MAST3O60307 1309 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 CDC45O75419 566 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 PDE6AP16499 860 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 PPP4CP60510 307 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GSTO1P78417 241 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MECOMQ03112 1051 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 SLF2Q8IX21 1173 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MTMR14Q8NCE2 650 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 APPBP2Q92624 585 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 FSD1Q9BTV5 496 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GGA3Q9NZ52 723 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 SERPINA10Q9UK55 444 aa13.42□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GAKO14976 1311 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 GPR75-ASB3A0A0A6YYF3 556 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 EPB41L2O43491 1005 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 IDH1O75874 414 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 LDHCP07864 332 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ZNF280AP59817 542 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 CERS3Q8IU89 383 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ERO1AQ96HE7 468 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MYO5AQ9Y4I1 1855 aaKnown RBP13.41□□□□□ -0.26
CDK5RAP3-204ENST00000577664 KIF4BQ2VIQ3 1234 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 C8orf34Q49A92 452 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MCMDC2Q4G0Z9 681 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 NAA16Q6N069 864 aaPredicted RBP13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 MAGEB6Q8N7X4 407 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RUFY2Q8WXA3 655 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 OSBP2Q969R2 916 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 ZDHHC15Q96MV8 337 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RAI14Q9P0K7 980 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 JAG2Q9Y219 1238 aa13.4□□□□□ -0.26
CDK5RAP3-204ENST00000577664 RAD50Q92878 1312 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ZNF532Q9HCE3 1301 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MYH7P12883 1935 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 AK9Q5TCS8 1911 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SGSM2O43147 1006 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 USP17L8P0C7I0 530 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ZBED3Q96IU2 234 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 RIOK1Q9BRS2 568 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MXD3Q9BW11 206 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 TTF2Q9UNY4 1162 aaKnown RBP13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 LAMB1P07942 1786 aa13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ASTN2O75129 1339 aaPredicted RBP13.39□□□□□ -0.27
CDK5RAP3-204ENST00000577664 UBE2Q2LH0YL09 131 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CYP7A1P22680 504 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 INHBEP58166 350 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 NMIQ13287 307 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 APOBEC3HQ6NTF7 200 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CASC1Q6TDU7 716 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MOB2Q70IA6 237 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ADGRA1Q86SQ6 560 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 NBPF11Q86T75 865 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 OGFOD1Q8N543 542 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 TEKT1Q969V4 418 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 FAM227BQ96M60 508 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 ESYT1Q9BSJ8 1104 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 PUS7LQ9H0K6 701 aaKnown RBP13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 EFCC1Q9HA90 598 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DIAPH3Q9NSV4 1193 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MROH7-TTC4A0A0A0MT08 1334 aa13.38□□□□□ -0.27
CDK5RAP3-204ENST00000577664 RPAP1Q9BWH6 1393 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 A0A0D9SFI3 127 aa13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CHGBP05060 677 aa13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CRKP46108 304 aa13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MFAP1P55081 439 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 KIAA0825Q8IV33 1275 aa13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 STRBPQ96SI9 672 aaKnown RBP13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MAST2Q6P0Q8 1798 aa13.37□□□□□ -0.27
CDK5RAP3-204ENST00000577664 BAG3O95817 575 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 GNAT2P19087 354 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 RHBDL3P58872 404 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 SLFNL1Q499Z3 407 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 GIMAP6Q6P9H5 292 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 CD99L2Q8TCZ2 262 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 BACH2Q9BYV9 841 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 DAGLAQ9Y4D2 1042 aa13.36□□□□□ -0.27
CDK5RAP3-204ENST00000577664 MYH2Q9UKX2 1941 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms