RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 SALL1Q9NSC2 1324 aa16.67■□□□□ 0.26
COPS3-214ENST00000577246 INHAP05111 366 aa16.66■□□□□ 0.26
COPS3-214ENST00000577246 PTPRAP18433 802 aa16.66■□□□□ 0.26
COPS3-214ENST00000577246 ZSCAN29Q8IWY8 852 aaPredicted RBP16.66■□□□□ 0.26
COPS3-214ENST00000577246 SLF2Q8IX21 1173 aa16.66■□□□□ 0.26
COPS3-214ENST00000577246 COA7Q96BR5 231 aa16.66■□□□□ 0.26
COPS3-214ENST00000577246 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
COPS3-214ENST00000577246 CEP290O15078 2479 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 PHF20L1A8MW92 1017 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 ATP2B3Q16720 1220 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 USP44Q9H0E7 712 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 CEP126Q9P2H0 1117 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 PNMA3Q9UL41 463 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 AFG3L2Q9Y4W6 797 aa16.65■□□□□ 0.26
COPS3-214ENST00000577246 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.26
COPS3-214ENST00000577246 SZT2Q5T011 3432 aa16.64■□□□□ 0.25
COPS3-214ENST00000577246 ANP32CO43423 234 aa16.64■□□□□ 0.25
COPS3-214ENST00000577246 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
COPS3-214ENST00000577246 ELNP15502 786 aa16.64■□□□□ 0.25
COPS3-214ENST00000577246 RGS3P49796 1198 aa16.64■□□□□ 0.25
COPS3-214ENST00000577246 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
COPS3-214ENST00000577246 DEFB118Q96PH6 123 aa16.64■□□□□ 0.25
COPS3-214ENST00000577246 PAK6Q9NQU5 681 aaPredicted RBP16.64■□□□□ 0.25
COPS3-214ENST00000577246 DLL1O00548 723 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 ZBTB22O15209 634 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 CIAO1O76071 339 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
COPS3-214ENST00000577246 NECAB2Q7Z6G3 386 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 DZIP1Q86YF9 867 aaKnown RBP16.63■□□□□ 0.25
COPS3-214ENST00000577246 TAOK2Q9UL54 1235 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 AGTPBP1Q9UPW5 1226 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 HDAC5Q9UQL6 1122 aa16.63■□□□□ 0.25
COPS3-214ENST00000577246 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
COPS3-214ENST00000577246 TRIM75PA6NK02 468 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 MAP3K10Q02779 954 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 FAM110CQ1W6H9 321 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 GAKO14976 1311 aa16.62■□□□□ 0.25
COPS3-214ENST00000577246 PABPC4Q13310 644 aaKnown RBP eCLIP16.61■□□□□ 0.25
COPS3-214ENST00000577246 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
COPS3-214ENST00000577246 GPR153Q6NV75 609 aa16.61■□□□□ 0.25
COPS3-214ENST00000577246 ATG9AQ7Z3C6 839 aa16.61■□□□□ 0.25
COPS3-214ENST00000577246 PROCA1Q8NCQ7 364 aaPredicted RBP16.61■□□□□ 0.25
COPS3-214ENST00000577246 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
COPS3-214ENST00000577246 IL15P40933 162 aaPredicted RBP16.6■□□□□ 0.25
COPS3-214ENST00000577246 GCLCP48506 637 aaPredicted RBP16.6■□□□□ 0.25
COPS3-214ENST00000577246 ANKRD13CQ8N6S4 541 aa16.6■□□□□ 0.25
COPS3-214ENST00000577246 PAWRQ96IZ0 340 aaKnown RBP16.6■□□□□ 0.25
COPS3-214ENST00000577246 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.6■□□□□ 0.25
COPS3-214ENST00000577246 SIL1Q9H173 461 aa16.6■□□□□ 0.25
COPS3-214ENST00000577246 STAP2Q9UGK3 403 aa16.6■□□□□ 0.25
COPS3-214ENST00000577246 PDS5AQ29RF7 1337 aaKnown RBP16.6■□□□□ 0.25
COPS3-214ENST00000577246 RFX7Q2KHR2 1363 aa16.6■□□□□ 0.25
COPS3-214ENST00000577246 HMGCRP04035 888 aa16.59■□□□□ 0.25
COPS3-214ENST00000577246 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
COPS3-214ENST00000577246 BMP8BP34820 402 aa16.59■□□□□ 0.25
COPS3-214ENST00000577246 FAM163AQ96GL9 167 aaPredicted RBP16.59■□□□□ 0.25
COPS3-214ENST00000577246 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
COPS3-214ENST00000577246 TBC1D12O60347 775 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
COPS3-214ENST00000577246 PHKA1P46020 1223 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 PICALMQ13492 652 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 SH3BP5LQ7L8J4 393 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 OSBPL5Q9H0X9 879 aaPredicted RBP16.58■□□□□ 0.24
COPS3-214ENST00000577246 ABCF2Q9UG63 623 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 DOCK2Q92608 1830 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
COPS3-214ENST00000577246 MROH7-TTC4A0A0A0MT08 1334 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 DDTLA6NHG4 134 aaPredicted RBP16.57■□□□□ 0.24
COPS3-214ENST00000577246 E9PSI1 815 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 SOX1O00570 391 aaPredicted RBP16.57■□□□□ 0.24
COPS3-214ENST00000577246 NPM3O75607 178 aaKnown RBP16.57■□□□□ 0.24
COPS3-214ENST00000577246 BTDP43251 543 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 CCDC102BQ68D86 513 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 FAM9BQ8IZU0 186 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 LRCH3Q96II8 777 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 NBPF3Q9H094 633 aa16.57■□□□□ 0.24
COPS3-214ENST00000577246 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
COPS3-214ENST00000577246 MGAMO43451 1857 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 ZNF521Q96K83 1311 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 MNX1P50219 401 aaPredicted RBP16.56■□□□□ 0.24
COPS3-214ENST00000577246 C7orf61Q8IZ16 206 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 ZNF280CQ8ND82 737 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 GDF15Q99988 308 aa16.56■□□□□ 0.24
COPS3-214ENST00000577246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.56■□□□□ 0.24
COPS3-214ENST00000577246 GSTO1P78417 241 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 RASGRF1Q13972 1273 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 MVPQ14764 893 aaKnown RBP16.55■□□□□ 0.24
COPS3-214ENST00000577246 ALDH1L2Q3SY69 923 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 DDX4Q9NQI0 724 aaKnown RBP16.55■□□□□ 0.24
COPS3-214ENST00000577246 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
COPS3-214ENST00000577246 GPR75-ASB3A0A0A6YYF3 556 aa16.54■□□□□ 0.24
COPS3-214ENST00000577246 LDHCP07864 332 aa16.54■□□□□ 0.24
COPS3-214ENST00000577246 SPP2Q13103 211 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms