RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 DAGLAQ9Y4D2 1042 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 IL16Q14005 1332 aa20.48■□□□□ 0.87
CTDNEP1-211ENST00000575783 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 PTPRAP18433 802 aa20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 MAGEA10P43363 369 aaPredicted RBP20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 SCYL3Q8IZE3 742 aa20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 ANKRD13CQ8N6S4 541 aa20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 SPINK5Q9NQ38 1064 aaPredicted RBP20.47■□□□□ 0.87
CTDNEP1-211ENST00000575783 PHF20L1A8MW92 1017 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 NBPF7P0C2Y1 421 aaPredicted RBP20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 TDHQ8IZJ6 230 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 WDR66Q8TBY9 1149 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 NBPF3Q9H094 633 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 AFG3L2Q9Y4W6 797 aa20.46■□□□□ 0.87
CTDNEP1-211ENST00000575783 ANKLE1Q8NAG6 615 aa20.45■□□□□ 0.86
CTDNEP1-211ENST00000575783 KLHDC4Q8TBB5 520 aa20.45■□□□□ 0.86
CTDNEP1-211ENST00000575783 UBE2OQ9C0C9 1292 aaKnown RBP20.45■□□□□ 0.86
CTDNEP1-211ENST00000575783 SLC45A1Q9Y2W3 748 aa20.45■□□□□ 0.86
CTDNEP1-211ENST00000575783 VCANP13611 3396 aa20.45■□□□□ 0.86
CTDNEP1-211ENST00000575783 TRIM75PA6NK02 468 aa20.44■□□□□ 0.86
CTDNEP1-211ENST00000575783 SALL2Q9Y467 1007 aaPredicted RBP20.44■□□□□ 0.86
CTDNEP1-211ENST00000575783 LRRFIP2Q9Y608 721 aaKnown RBP20.44■□□□□ 0.86
CTDNEP1-211ENST00000575783 PUM3Q15397 648 aaKnown RBP20.43■□□□□ 0.86
CTDNEP1-211ENST00000575783 ZSCAN29Q8IWY8 852 aaPredicted RBP20.43■□□□□ 0.86
CTDNEP1-211ENST00000575783 C11orf49Q9H6J7 331 aa20.43■□□□□ 0.86
CTDNEP1-211ENST00000575783 LAMA2P24043 3122 aaKnown RBP20.43■□□□□ 0.86
CTDNEP1-211ENST00000575783 HMGCRP04035 888 aa20.42■□□□□ 0.86
CTDNEP1-211ENST00000575783 PRDX5P30044 214 aa20.42■□□□□ 0.86
CTDNEP1-211ENST00000575783 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.42■□□□□ 0.86
CTDNEP1-211ENST00000575783 HMX1Q9NP08 348 aaPredicted RBP20.42■□□□□ 0.86
CTDNEP1-211ENST00000575783 LDHBP07195 334 aaKnown RBP20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 SLURP2P0DP57 97 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 FGFR2P21802 821 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 RGS3P49796 1198 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 TRIM32Q13049 653 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 RABL6Q3YEC7 729 aaPredicted RBP20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 CCDC84Q86UT8 332 aaPredicted RBP20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 ANKRD44Q8N8A2 993 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 AGTPBP1Q9UPW5 1226 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 RPTORQ8N122 1335 aa20.41■□□□□ 0.86
CTDNEP1-211ENST00000575783 TREML2Q5T2D2 321 aa20.4■□□□□ 0.86
CTDNEP1-211ENST00000575783 KIF16BQ96L93 1317 aa20.4■□□□□ 0.86
CTDNEP1-211ENST00000575783 SLC5A1P13866 664 aa20.39■□□□□ 0.85
CTDNEP1-211ENST00000575783 FAM110CQ1W6H9 321 aa20.39■□□□□ 0.85
CTDNEP1-211ENST00000575783 PNMA3Q9UL41 463 aa20.39■□□□□ 0.85
CTDNEP1-211ENST00000575783 ATRNL1Q5VV63 1379 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 UTYO14607 1347 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 CTNND1O60716 968 aaKnown RBP20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 CCDC184Q52MB2 194 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 SH3BP5LQ7L8J4 393 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 LPIN2Q92539 896 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 MGAMO43451 1857 aa20.38■□□□□ 0.85
CTDNEP1-211ENST00000575783 ENTPD3O75355 529 aa20.37■□□□□ 0.85
CTDNEP1-211ENST00000575783 GJD2Q9UKL4 321 aa20.37■□□□□ 0.85
CTDNEP1-211ENST00000575783 OGDHLQ9ULD0 1010 aa20.37■□□□□ 0.85
CTDNEP1-211ENST00000575783 DDTLA6NHG4 134 aaPredicted RBP20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 MDM2Q00987 491 aaPredicted RBP20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 WDR63Q8IWG1 891 aa20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 FAM161BQ96MY7 647 aa20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 IDI2Q9BXS1 227 aa20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 EYSQ5T1H1 3165 aa20.36■□□□□ 0.85
CTDNEP1-211ENST00000575783 AK9Q5TCS8 1911 aa20.35■□□□□ 0.85
CTDNEP1-211ENST00000575783 MAP3K10Q02779 954 aa20.35■□□□□ 0.85
CTDNEP1-211ENST00000575783 PICALMQ13492 652 aa20.35■□□□□ 0.85
CTDNEP1-211ENST00000575783 GNL3LQ9NVN8 582 aaKnown RBP20.35■□□□□ 0.85
CTDNEP1-211ENST00000575783 PFASO15067 1338 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 ALPK3Q96L96 1907 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 CYP2B6P20813 491 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 GCLCP48506 637 aaPredicted RBP20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 SPP2Q13103 211 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 TRIB2Q92519 343 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 GUCD1Q96NT3 240 aa20.34■□□□□ 0.85
CTDNEP1-211ENST00000575783 EYA2O00167 538 aa20.33■□□□□ 0.85
CTDNEP1-211ENST00000575783 DDX4Q9NQI0 724 aaKnown RBP20.33■□□□□ 0.85
CTDNEP1-211ENST00000575783 SPTBN5Q9NRC6 3674 aaKnown RBP20.33■□□□□ 0.84
CTDNEP1-211ENST00000575783 POTEB2H3BUK9 544 aa20.32■□□□□ 0.84
CTDNEP1-211ENST00000575783 PRKAR2AP13861 404 aaKnown RBP20.32■□□□□ 0.84
CTDNEP1-211ENST00000575783 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
CTDNEP1-211ENST00000575783 PROCA1Q8NCQ7 364 aaPredicted RBP20.32■□□□□ 0.84
CTDNEP1-211ENST00000575783 FAM196BA6NMK8 535 aa20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 HMGCS2P54868 508 aa20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 PABPC4Q13310 644 aaKnown RBP eCLIP20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 LRRC26Q2I0M4 334 aa20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 ASCC2Q9H1I8 757 aaPredicted RBP20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 DENND2AQ9ULE3 1009 aa20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 DNAH12Q6ZR08 3092 aa20.31■□□□□ 0.84
CTDNEP1-211ENST00000575783 SALL1Q9NSC2 1324 aa20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 ATP2B3Q16720 1220 aa20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 FAM109BQ6ICB4 259 aaPredicted RBP20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 DZIP1Q86YF9 867 aaKnown RBP20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 ZNF280CQ8ND82 737 aa20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 CACNA1FO60840 1977 aa20.3■□□□□ 0.84
CTDNEP1-211ENST00000575783 PHKA1P46020 1223 aa20.29■□□□□ 0.84
CTDNEP1-211ENST00000575783 RFX5P48382 616 aaPredicted RBP20.29■□□□□ 0.84
CTDNEP1-211ENST00000575783 MAP3K21Q5TCX8 1036 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms