RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 CAPNS2Q96L46 248 aa18.38■□□□□ 0.53
LITAF-217ENST00000575426 WDR33Q9C0J8 1336 aaKnown RBP18.38■□□□□ 0.53
LITAF-217ENST00000575426 ADD2P35612 726 aa18.37■□□□□ 0.53
LITAF-217ENST00000575426 USP5P45974 858 aa18.37■□□□□ 0.53
LITAF-217ENST00000575426 VEGFBP49765 207 aa18.37■□□□□ 0.53
LITAF-217ENST00000575426 TGFBRAP1Q8WUH2 860 aa18.37■□□□□ 0.53
LITAF-217ENST00000575426 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
LITAF-217ENST00000575426 DDX4Q9NQI0 724 aaKnown RBP18.37■□□□□ 0.53
LITAF-217ENST00000575426 USP2O75604 605 aaPredicted RBP18.36■□□□□ 0.53
LITAF-217ENST00000575426 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
LITAF-217ENST00000575426 UBE3CQ15386 1083 aa18.36■□□□□ 0.53
LITAF-217ENST00000575426 MAP3K11Q16584 847 aa18.36■□□□□ 0.53
LITAF-217ENST00000575426 ZFPM1Q8IX07 1006 aa18.36■□□□□ 0.53
LITAF-217ENST00000575426 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
LITAF-217ENST00000575426 FZD1Q9UP38 647 aa18.36■□□□□ 0.53
LITAF-217ENST00000575426 SSC5DA1L4H1 1573 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 UNCXA6NJT0 531 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 CDAN1Q8IWY9 1227 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 ANKRD13AQ8IZ07 590 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 CSRNP1Q96S65 589 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 FSD1Q9BTV5 496 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 ZNF341Q9BYN7 854 aa18.35■□□□□ 0.53
LITAF-217ENST00000575426 CRNKL1Q9BZJ0 848 aaKnown RBP18.35■□□□□ 0.53
LITAF-217ENST00000575426 OSBPL5Q9H0X9 879 aaPredicted RBP18.35■□□□□ 0.53
LITAF-217ENST00000575426 RFX7Q2KHR2 1363 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 RNF113AO15541 343 aaKnown RBP18.34■□□□□ 0.53
LITAF-217ENST00000575426 LDLRAD1Q5T700 205 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 MAPKAPK5Q8IW41 473 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 EVI5LQ96CN4 794 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 CCDC136Q96JN2 1154 aa18.34■□□□□ 0.53
LITAF-217ENST00000575426 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
LITAF-217ENST00000575426 OTOFQ9HC10 1997 aa18.33■□□□□ 0.53
LITAF-217ENST00000575426 TRIM6-TRIM34B2RNG4 842 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 MAP3K9P80192 1104 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 AIDAQ96BJ3 306 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 RIOK1Q9BRS2 568 aaKnown RBP18.33■□□□□ 0.52
LITAF-217ENST00000575426 OSBPL3Q9H4L5 887 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 CSADQ9Y600 493 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 NAV1Q8NEY1 1877 aa18.33■□□□□ 0.52
LITAF-217ENST00000575426 FLT1P17948 1338 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 DDTLA6NHG4 134 aaPredicted RBP18.32■□□□□ 0.52
LITAF-217ENST00000575426 MAP2K2P36507 400 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 NOGQ13253 232 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
LITAF-217ENST00000575426 APPBP2Q92624 585 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 COL2A1P02458 1487 aaPredicted RBP18.32■□□□□ 0.52
LITAF-217ENST00000575426 CEP350Q5VT06 3117 aa18.32■□□□□ 0.52
LITAF-217ENST00000575426 MBD4O95243 580 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 HLA-DOAP06340 250 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 SLC10A3P09131 477 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 SLFNL1Q499Z3 407 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 SH3BP5LQ7L8J4 393 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 DDRGK1Q96HY6 314 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 WRNIP1Q96S55 665 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 ARMT1Q9H993 441 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 PI4KBQ9UBF8 816 aa18.31■□□□□ 0.52
LITAF-217ENST00000575426 BAZ2AQ9UIF9 1905 aaKnown RBP18.31■□□□□ 0.52
LITAF-217ENST00000575426 ATRNL1Q5VV63 1379 aa18.3■□□□□ 0.52
LITAF-217ENST00000575426 AOC2O75106 756 aa18.3■□□□□ 0.52
LITAF-217ENST00000575426 RASAL3Q86YV0 1011 aa18.3■□□□□ 0.52
LITAF-217ENST00000575426 LCORLQ8N3X6 602 aa18.3■□□□□ 0.52
LITAF-217ENST00000575426 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.3■□□□□ 0.52
LITAF-217ENST00000575426 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.3■□□□□ 0.52
LITAF-217ENST00000575426 SAP30BPQ9UHR5 308 aaKnown RBP18.3■□□□□ 0.52
LITAF-217ENST00000575426 POLR3DP05423 398 aaPredicted RBP18.29■□□□□ 0.52
LITAF-217ENST00000575426 ERICH6BQ5W0A0 696 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 TTC6Q86TZ1 520 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 CRACR2BQ8N4Y2 399 aaPredicted RBP18.29■□□□□ 0.52
LITAF-217ENST00000575426 CLMNQ96JQ2 1002 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 PUS7LQ9H0K6 701 aaKnown RBP18.29■□□□□ 0.52
LITAF-217ENST00000575426 ELP3Q9H9T3 547 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 ATP8A2Q9NTI2 1148 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 PALD1Q9ULE6 856 aa18.29■□□□□ 0.52
LITAF-217ENST00000575426 MYH8P13535 1937 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 FAM155AB1AL88 458 aaPredicted RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 TBC1D12O60347 775 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 CHGBP05060 677 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 PDE4AP27815 886 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 MAP2K1Q02750 393 aaPredicted RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 TICAM2Q86XR7 235 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 FOXP4Q8IVH2 680 aaPredicted RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 AMOTL1Q8IY63 956 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 BEGAINQ9BUH8 593 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 HERC5Q9UII4 1024 aaKnown RBP18.28■□□□□ 0.52
LITAF-217ENST00000575426 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 ATAD5Q96QE3 1844 aa18.28■□□□□ 0.52
LITAF-217ENST00000575426 KIF23Q02241 960 aaPredicted RBP18.27■□□□□ 0.52
LITAF-217ENST00000575426 MAP3K10Q02779 954 aa18.27■□□□□ 0.52
LITAF-217ENST00000575426 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
LITAF-217ENST00000575426 VGLL4Q14135 290 aa18.27■□□□□ 0.52
LITAF-217ENST00000575426 SDR42E1Q8WUS8 393 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms