RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 OSBP2Q969R2 916 aa19.6■□□□□ 0.73
PFN1-203ENST00000574872 AIDAQ96BJ3 306 aa19.6■□□□□ 0.73
PFN1-203ENST00000574872 SEC62Q99442 399 aaKnown RBP19.6■□□□□ 0.73
PFN1-203ENST00000574872 GBA2Q9HCG7 927 aaPredicted RBP19.6■□□□□ 0.73
PFN1-203ENST00000574872 FLT1P17948 1338 aa19.59■□□□□ 0.73
PFN1-203ENST00000574872 SUPT20HL1Q3ZLR7 823 aa19.59■□□□□ 0.73
PFN1-203ENST00000574872 MOB2Q70IA6 237 aa19.59■□□□□ 0.73
PFN1-203ENST00000574872 CERS3Q8IU89 383 aa19.59■□□□□ 0.73
PFN1-203ENST00000574872 CRNKL1Q9BZJ0 848 aaKnown RBP19.59■□□□□ 0.73
PFN1-203ENST00000574872 OSBPL5Q9H0X9 879 aaPredicted RBP19.59■□□□□ 0.73
PFN1-203ENST00000574872 ABT1Q9ULW3 272 aaKnown RBP19.59■□□□□ 0.73
PFN1-203ENST00000574872 RPAP1Q9BWH6 1393 aaPredicted RBP19.58■□□□□ 0.73
PFN1-203ENST00000574872 DDTLA6NHG4 134 aaPredicted RBP19.58■□□□□ 0.72
PFN1-203ENST00000574872 PRKAB2O43741 272 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 SDSP20132 328 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 SLC4A8Q2Y0W8 1093 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 ZMYM1Q5SVZ6 1142 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 SH3BP5LQ7L8J4 393 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 C2orf69Q8N8R5 385 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 SDR42E1Q8WUS8 393 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 CREBZFQ9NS37 354 aa19.58■□□□□ 0.72
PFN1-203ENST00000574872 SAP30BPQ9UHR5 308 aaKnown RBP19.58■□□□□ 0.72
PFN1-203ENST00000574872 CDK5RAP2Q96SN8 1893 aa19.57■□□□□ 0.72
PFN1-203ENST00000574872 FAM227BQ96M60 508 aa19.57■□□□□ 0.72
PFN1-203ENST00000574872 CSRNP1Q96S65 589 aa19.57■□□□□ 0.72
PFN1-203ENST00000574872 AK9Q5TCS8 1911 aa19.57■□□□□ 0.72
PFN1-203ENST00000574872 GPAA1O43292 621 aa19.56■□□□□ 0.72
PFN1-203ENST00000574872 NPM3O75607 178 aaKnown RBP19.56■□□□□ 0.72
PFN1-203ENST00000574872 NMIQ13287 307 aaPredicted RBP19.56■□□□□ 0.72
PFN1-203ENST00000574872 CCDC129Q6ZRS4 1044 aa19.56■□□□□ 0.72
PFN1-203ENST00000574872 MIGA2Q7L4E1 593 aa19.56■□□□□ 0.72
PFN1-203ENST00000574872 ANGEL1Q9UNK9 670 aaKnown RBP19.56■□□□□ 0.72
PFN1-203ENST00000574872 A0A0D9SFI3 127 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 UBE2Q2LH0YL09 131 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 SLURP2P0DP57 97 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 HUNKP57058 714 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 STRBPQ96SI9 672 aaKnown RBP19.55■□□□□ 0.72
PFN1-203ENST00000574872 DIAPH3Q9NSV4 1193 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.55■□□□□ 0.72
PFN1-203ENST00000574872 PALD1Q9ULE6 856 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 TLL2Q9Y6L7 1015 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 SLC4A4Q9Y6R1 1079 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 PAPPA2Q9BXP8 1791 aa19.55■□□□□ 0.72
PFN1-203ENST00000574872 FOCADQ5VW36 1801 aa19.54■□□□□ 0.72
PFN1-203ENST00000574872 PPP1R12BO60237 982 aaPredicted RBP19.54■□□□□ 0.72
PFN1-203ENST00000574872 ARMC9Q7Z3E5 817 aa19.54■□□□□ 0.72
PFN1-203ENST00000574872 SAPCD2Q86UD0 394 aa19.54■□□□□ 0.72
PFN1-203ENST00000574872 ATRNL1Q5VV63 1379 aa19.54■□□□□ 0.72
PFN1-203ENST00000574872 FKBP1BP68106 108 aa19.53■□□□□ 0.72
PFN1-203ENST00000574872 PAXIP1Q6ZW49 1069 aaPredicted RBP19.53■□□□□ 0.72
PFN1-203ENST00000574872 HOOK2Q96ED9 719 aa19.53■□□□□ 0.72
PFN1-203ENST00000574872 DCP1AQ9NPI6 582 aaPredicted RBP19.53■□□□□ 0.72
PFN1-203ENST00000574872 MKRN1Q9UHC7 482 aaKnown RBP19.53■□□□□ 0.72
PFN1-203ENST00000574872 NAV1Q8NEY1 1877 aa19.52■□□□□ 0.72
PFN1-203ENST00000574872 FAM196BA6NMK8 535 aa19.52■□□□□ 0.72
PFN1-203ENST00000574872 USP2O75604 605 aaPredicted RBP19.52■□□□□ 0.72
PFN1-203ENST00000574872 DCAF15Q66K64 600 aa19.52■□□□□ 0.72
PFN1-203ENST00000574872 CWC27Q6UX04 472 aaKnown RBP19.52■□□□□ 0.72
PFN1-203ENST00000574872 HELLSQ9NRZ9 838 aa19.52■□□□□ 0.72
PFN1-203ENST00000574872 MCM9Q9NXL9 1143 aa19.52■□□□□ 0.72
PFN1-203ENST00000574872 COL2A1P02458 1487 aaPredicted RBP19.52■□□□□ 0.72
PFN1-203ENST00000574872 HIP1O00291 1037 aa19.51■□□□□ 0.71
PFN1-203ENST00000574872 APPP05067 770 aa19.51■□□□□ 0.71
PFN1-203ENST00000574872 POLR3DP05423 398 aaPredicted RBP19.51■□□□□ 0.71
PFN1-203ENST00000574872 IREB2P48200 963 aaKnown RBP19.51■□□□□ 0.71
PFN1-203ENST00000574872 GRM1Q13255 1194 aa19.51■□□□□ 0.71
PFN1-203ENST00000574872 MCMDC2Q4G0Z9 681 aa19.51■□□□□ 0.71
PFN1-203ENST00000574872 ZNF589Q86UQ0 364 aaPredicted RBP19.51■□□□□ 0.71
PFN1-203ENST00000574872 DHX36Q9H2U1 1008 aaKnown RBP19.51■□□□□ 0.71
PFN1-203ENST00000574872 HLA-DOAP06340 250 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 CYP2D6P10635 497 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 EVX2Q03828 476 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 BMP2KLQ5H9B9 411 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 TICAM2Q86XR7 235 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 DDRGK1Q96HY6 314 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 WRNIP1Q96S55 665 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 ZNF341Q9BYN7 854 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 ATP8A2Q9NTI2 1148 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 PI4KBQ9UBF8 816 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 MYH1P12882 1939 aa19.5■□□□□ 0.71
PFN1-203ENST00000574872 DDX60LQ5H9U9 1706 aaKnown RBP19.49■□□□□ 0.71
PFN1-203ENST00000574872 CYP2D7A0A087X1C5 515 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 RASSF10A6NK89 507 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 GSG1L2A8MUP6 293 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 GNAT2P19087 354 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 DEFB115Q30KQ5 88 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 VPS53Q5VIR6 699 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 CRACR2BQ8N4Y2 399 aaPredicted RBP19.49■□□□□ 0.71
PFN1-203ENST00000574872 KLRG1Q96E93 195 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 CLMNQ96JQ2 1002 aa19.49■□□□□ 0.71
PFN1-203ENST00000574872 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.49■□□□□ 0.71
PFN1-203ENST00000574872 EPB41L4AQ9HCS5 686 aaPredicted RBP19.49■□□□□ 0.71
PFN1-203ENST00000574872 CHMLP26374 656 aa19.48■□□□□ 0.71
PFN1-203ENST00000574872 TDO2P48775 406 aa19.48■□□□□ 0.71
PFN1-203ENST00000574872 PLCD1P51178 756 aa19.48■□□□□ 0.71
PFN1-203ENST00000574872 LDLRAD1Q5T700 205 aa19.48■□□□□ 0.71
PFN1-203ENST00000574872 CYP4F22Q6NT55 531 aa19.48■□□□□ 0.71
PFN1-203ENST00000574872 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.48■□□□□ 0.715e-69■■□□□ 13.8
PFN1-203ENST00000574872 TRIM34Q9BYJ4 488 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms