RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 PICALMQ13492 652 aa18.88■□□□□ 0.61
CCNE1-204ENST00000574121 ATP8A2Q9NTI2 1148 aa18.88■□□□□ 0.61
CCNE1-204ENST00000574121 FLT1P17948 1338 aa18.88■□□□□ 0.61
CCNE1-204ENST00000574121 CELF2O95319 508 aaKnown RBP18.87■□□□□ 0.61
CCNE1-204ENST00000574121 MFAP1P55081 439 aaKnown RBP18.87■□□□□ 0.61
CCNE1-204ENST00000574121 MCMDC2Q4G0Z9 681 aa18.87■□□□□ 0.61
CCNE1-204ENST00000574121 GIMAP6Q6P9H5 292 aa18.87■□□□□ 0.61
CCNE1-204ENST00000574121 DDRGK1Q96HY6 314 aa18.87■□□□□ 0.61
CCNE1-204ENST00000574121 MKRN1Q9UHC7 482 aaKnown RBP18.87■□□□□ 0.61
CCNE1-204ENST00000574121 M0R2C6 588 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 APLP1P51693 650 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 NMIQ13287 307 aaPredicted RBP18.86■□□□□ 0.61
CCNE1-204ENST00000574121 NBPF12Q5TAG4 269 aaPredicted RBP18.86■□□□□ 0.61
CCNE1-204ENST00000574121 PRAMEF18Q5VWM3 479 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 MAPKAPK5Q8IW41 473 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 ZSCAN29Q8IWY8 852 aaPredicted RBP18.86■□□□□ 0.61
CCNE1-204ENST00000574121 RUFY2Q8WXA3 655 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 FAM227BQ96M60 508 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 SLC4A4Q9Y6R1 1079 aa18.86■□□□□ 0.61
CCNE1-204ENST00000574121 POLR2AP24928 1970 aaKnown RBP18.86■□□□□ 0.61
CCNE1-204ENST00000574121 RAD50Q92878 1312 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 A0A0D9SFI3 127 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 TMEM88BA6NKF7 163 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 FMR1Q06787 632 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCNE1-204ENST00000574121 CST9Q5W186 159 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 DLK2Q6UY11 383 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 ZFPM1Q8IX07 1006 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 CSRNP1Q96S65 589 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 SEC62Q99442 399 aaKnown RBP18.85■□□□□ 0.61
CCNE1-204ENST00000574121 DCP1AQ9NPI6 582 aaPredicted RBP18.85■□□□□ 0.61
CCNE1-204ENST00000574121 TAOK2Q9UL54 1235 aa18.85■□□□□ 0.61
CCNE1-204ENST00000574121 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
CCNE1-204ENST00000574121 CHMLP26374 656 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 DCAF15Q66K64 600 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 CWC27Q6UX04 472 aaKnown RBP18.84■□□□□ 0.61
CCNE1-204ENST00000574121 SH3BP5LQ7L8J4 393 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 C2orf69Q8N8R5 385 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 ZNF408Q9H9D4 720 aa18.84■□□□□ 0.61
CCNE1-204ENST00000574121 GBA2Q9HCG7 927 aaPredicted RBP18.84■□□□□ 0.61
CCNE1-204ENST00000574121 CCDC171Q6TFL3 1326 aa18.83■□□□□ 0.61
CCNE1-204ENST00000574121 DDTLA6NHG4 134 aaPredicted RBP18.83■□□□□ 0.6
CCNE1-204ENST00000574121 UNCXA6NJT0 531 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 PATL2C9JE40 543 aaKnown RBP18.83■□□□□ 0.6
CCNE1-204ENST00000574121 PRKAB2O43741 272 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 HLA-DOAP06340 250 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 MAP3K10Q02779 954 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 MAP3K11Q16584 847 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 ARMC9Q7Z3E5 817 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 TTC6Q86TZ1 520 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 NACAP1Q9BZK3 213 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 CREBZFQ9NS37 354 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 MCM9Q9NXL9 1143 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 PI4KBQ9UBF8 816 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 SSC5DA1L4H1 1573 aa18.83■□□□□ 0.6
CCNE1-204ENST00000574121 AK9Q5TCS8 1911 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 FOCADQ5VW36 1801 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 GSG1L2A8MUP6 293 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 TBC1D12O60347 775 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 FOXP4Q8IVH2 680 aaPredicted RBP18.82■□□□□ 0.6
CCNE1-204ENST00000574121 AMOTL1Q8IY63 956 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 EHD4Q9H223 541 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 HERC5Q9UII4 1024 aaKnown RBP18.82■□□□□ 0.6
CCNE1-204ENST00000574121 PALD1Q9ULE6 856 aa18.82■□□□□ 0.6
CCNE1-204ENST00000574121 PAPPA2Q9BXP8 1791 aa18.81■□□□□ 0.6
CCNE1-204ENST00000574121 HSPA6P17066 643 aa18.81■□□□□ 0.6
CCNE1-204ENST00000574121 CASC1Q6TDU7 716 aa18.81■□□□□ 0.6
CCNE1-204ENST00000574121 METTL16Q86W50 562 aaKnown RBP18.81■□□□□ 0.6
CCNE1-204ENST00000574121 ARPP21Q9UBL0 812 aaPredicted RBP18.81■□□□□ 0.6
CCNE1-204ENST00000574121 TRPM7Q96QT4 1865 aa18.81■□□□□ 0.6
CCNE1-204ENST00000574121 CDC45O75419 566 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 APPP05067 770 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 POLR3DP05423 398 aaPredicted RBP18.8■□□□□ 0.6
CCNE1-204ENST00000574121 IREB2P48200 963 aaKnown RBP18.8■□□□□ 0.6
CCNE1-204ENST00000574121 CCDC129Q6ZRS4 1044 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 SAPCD2Q86UD0 394 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 ZNF589Q86UQ0 364 aaPredicted RBP18.8■□□□□ 0.6
CCNE1-204ENST00000574121 HHIPL1Q96JK4 782 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 ZNF341Q9BYN7 854 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 SAP30BPQ9UHR5 308 aaKnown RBP18.8■□□□□ 0.6
CCNE1-204ENST00000574121 TLL2Q9Y6L7 1015 aa18.8■□□□□ 0.6
CCNE1-204ENST00000574121 ZMYM6O95789 1325 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 USP2O75604 605 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-204ENST00000574121 TTLL12Q14166 644 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-204ENST00000574121 ALX1Q15699 326 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 SBK1Q52WX2 424 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 IFNL3Q8IZI9 196 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 KLRG1Q96E93 195 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 EPB41L4AQ9HCS5 686 aaPredicted RBP18.79■□□□□ 0.6
CCNE1-204ENST00000574121 DDX60LQ5H9U9 1706 aaKnown RBP18.79■□□□□ 0.6
CCNE1-204ENST00000574121 CDK5RAP2Q96SN8 1893 aa18.79■□□□□ 0.6
CCNE1-204ENST00000574121 USP17L12C9JPN9 530 aa18.78■□□□□ 0.6
CCNE1-204ENST00000574121 USP17L21D6R901 530 aa18.78■□□□□ 0.6
CCNE1-204ENST00000574121 FOXP2O15409 715 aa18.78■□□□□ 0.6
CCNE1-204ENST00000574121 SGSM2O43147 1006 aa18.78■□□□□ 0.6
CCNE1-204ENST00000574121 HSPD1P10809 573 aaKnown RBP18.78■□□□□ 0.6
CCNE1-204ENST00000574121 TDO2P48775 406 aa18.78■□□□□ 0.6
CCNE1-204ENST00000574121 LDLRAD1Q5T700 205 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms