RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 PRAMEF18Q5VWM3 479 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 ZFPM1Q8IX07 1006 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 FAM151AQ8WW52 585 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 FLT1P17948 1338 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 LAMB1P07942 1786 aa26.58■■□□□ 1.85
RAB40B-207ENST00000572603 OTOFQ9HC10 1997 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 TNNI2P48788 182 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 TCP10Q12799 353 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 PICALMQ13492 652 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 AIDAQ96BJ3 306 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 ATRNL1Q5VV63 1379 aa26.57■■□□□ 1.84
RAB40B-207ENST00000572603 GPAA1O43292 621 aa26.56■■□□□ 1.84
RAB40B-207ENST00000572603 SH3BP5LQ7L8J4 393 aa26.56■■□□□ 1.84
RAB40B-207ENST00000572603 TGFBRAP1Q8WUH2 860 aa26.56■■□□□ 1.84
RAB40B-207ENST00000572603 STRBPQ96SI9 672 aaKnown RBP26.56■■□□□ 1.84
RAB40B-207ENST00000572603 OSBPL5Q9H0X9 879 aaPredicted RBP26.56■■□□□ 1.84
RAB40B-207ENST00000572603 MKRN1Q9UHC7 482 aaKnown RBP26.56■■□□□ 1.84
RAB40B-207ENST00000572603 PRKAB2O43741 272 aa26.55■■□□□ 1.84
RAB40B-207ENST00000572603 MAPKAPK5Q8IW41 473 aa26.55■■□□□ 1.84
RAB40B-207ENST00000572603 CRNKL1Q9BZJ0 848 aaKnown RBP26.55■■□□□ 1.84
RAB40B-207ENST00000572603 HELLSQ9NRZ9 838 aa26.55■■□□□ 1.84
RAB40B-207ENST00000572603 CCDC129Q6ZRS4 1044 aa26.54■■□□□ 1.84
RAB40B-207ENST00000572603 SDR42E1Q8WUS8 393 aa26.54■■□□□ 1.84
RAB40B-207ENST00000572603 HIP1O00291 1037 aa26.53■■□□□ 1.84
RAB40B-207ENST00000572603 CHMLP26374 656 aa26.53■■□□□ 1.84
RAB40B-207ENST00000572603 NBPF12Q5TAG4 269 aaPredicted RBP26.53■■□□□ 1.84
RAB40B-207ENST00000572603 IL25Q9H293 177 aa26.53■■□□□ 1.84
RAB40B-207ENST00000572603 DIAPH3Q9NSV4 1193 aa26.53■■□□□ 1.84
RAB40B-207ENST00000572603 DDTLA6NHG4 134 aaPredicted RBP26.52■■□□□ 1.84
RAB40B-207ENST00000572603 FOXP2O15409 715 aa26.52■■□□□ 1.84
RAB40B-207ENST00000572603 ZNF589Q86UQ0 364 aaPredicted RBP26.52■■□□□ 1.84
RAB40B-207ENST00000572603 USP5P45974 858 aa26.51■■□□□ 1.83
RAB40B-207ENST00000572603 MCMDC2Q4G0Z9 681 aa26.51■■□□□ 1.83
RAB40B-207ENST00000572603 CST9Q5W186 159 aa26.51■■□□□ 1.83
RAB40B-207ENST00000572603 DCP1AQ9NPI6 582 aaPredicted RBP26.51■■□□□ 1.83
RAB40B-207ENST00000572603 SLC4A4Q9Y6R1 1079 aa26.51■■□□□ 1.83
RAB40B-207ENST00000572603 C1QTNF8P60827 252 aa26.5■■□□□ 1.83
RAB40B-207ENST00000572603 CWC27Q6UX04 472 aaKnown RBP26.5■■□□□ 1.83
RAB40B-207ENST00000572603 EPB41L4AQ9HCS5 686 aaPredicted RBP26.5■■□□□ 1.83
RAB40B-207ENST00000572603 LAMA4Q16363 1823 aa26.49■■□□□ 1.83
RAB40B-207ENST00000572603 CCDC171Q6TFL3 1326 aa26.49■■□□□ 1.83
RAB40B-207ENST00000572603 GSG1L2A8MUP6 293 aa26.49■■□□□ 1.83
RAB40B-207ENST00000572603 CELF2O95319 508 aaKnown RBP26.49■■□□□ 1.83
RAB40B-207ENST00000572603 ZNF408Q9H9D4 720 aa26.49■■□□□ 1.83
RAB40B-207ENST00000572603 RAD50Q92878 1312 aa26.48■■□□□ 1.83
RAB40B-207ENST00000572603 ATP8A2Q9NTI2 1148 aa26.48■■□□□ 1.83
RAB40B-207ENST00000572603 SAP30BPQ9UHR5 308 aaKnown RBP26.48■■□□□ 1.83
RAB40B-207ENST00000572603 GNAT2P19087 354 aa26.47■■□□□ 1.83
RAB40B-207ENST00000572603 VPS53Q5VIR6 699 aa26.47■■□□□ 1.83
RAB40B-207ENST00000572603 CSRNP1Q96S65 589 aa26.47■■□□□ 1.83
RAB40B-207ENST00000572603 PALD1Q9ULE6 856 aa26.47■■□□□ 1.83
RAB40B-207ENST00000572603 SLURP2P0DP57 97 aa26.46■■□□□ 1.83
RAB40B-207ENST00000572603 EVX2Q03828 476 aa26.46■■□□□ 1.83
RAB40B-207ENST00000572603 SUPT20HL1Q3ZLR7 823 aa26.46■■□□□ 1.83
RAB40B-207ENST00000572603 FZD1Q9UP38 647 aa26.46■■□□□ 1.83
RAB40B-207ENST00000572603 MYH8P13535 1937 aa26.45■■□□□ 1.83
RAB40B-207ENST00000572603 ATAD5Q96QE3 1844 aa26.45■■□□□ 1.82
RAB40B-207ENST00000572603 APLP1P51693 650 aa26.45■■□□□ 1.82
RAB40B-207ENST00000572603 GIMAP6Q6P9H5 292 aa26.45■■□□□ 1.82
RAB40B-207ENST00000572603 ZSCAN29Q8IWY8 852 aaPredicted RBP26.45■■□□□ 1.82
RAB40B-207ENST00000572603 DHX36Q9H2U1 1008 aaKnown RBP26.45■■□□□ 1.82
RAB40B-207ENST00000572603 GBA2Q9HCG7 927 aaPredicted RBP26.45■■□□□ 1.82
RAB40B-207ENST00000572603 NF2P35240 595 aa26.44■■□□□ 1.82
RAB40B-207ENST00000572603 MOB2Q70IA6 237 aa26.44■■□□□ 1.82
RAB40B-207ENST00000572603 MCM9Q9NXL9 1143 aa26.44■■□□□ 1.82
RAB40B-207ENST00000572603 DOCK1Q14185 1865 aa26.44■■□□□ 1.82
RAB40B-207ENST00000572603 PATL2C9JE40 543 aaKnown RBP26.43■■□□□ 1.82
RAB40B-207ENST00000572603 SGSM2O43147 1006 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 CDC45O75419 566 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 CYP2D6P10635 497 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 MAP3K10Q02779 954 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 SLC4A8Q2Y0W8 1093 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 IFNL3Q8IZI9 196 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 DNAJC18Q9H819 358 aa26.43■■□□□ 1.82
RAB40B-207ENST00000572603 TMEM88BA6NKF7 163 aa26.42■■□□□ 1.82
RAB40B-207ENST00000572603 FKBP1BP68106 108 aa26.42■■□□□ 1.82
RAB40B-207ENST00000572603 MAP3K11Q16584 847 aa26.42■■□□□ 1.82
RAB40B-207ENST00000572603 METTL16Q86W50 562 aaKnown RBP26.42■■□□□ 1.82
RAB40B-207ENST00000572603 CYP2D7A0A087X1C5 515 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 SMIM22K7EJ46 135 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 USP2O75604 605 aaPredicted RBP26.41■■□□□ 1.82
RAB40B-207ENST00000572603 HSPD1P10809 573 aaKnown RBP26.41■■□□□ 1.82
RAB40B-207ENST00000572603 PLCD1P51178 756 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 PRKG1Q13976 671 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 CTR9Q6PD62 1173 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 RUFY2Q8WXA3 655 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 HOOK2Q96ED9 719 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 ESYT1Q9BSJ8 1104 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 EHD4Q9H223 541 aa26.41■■□□□ 1.82
RAB40B-207ENST00000572603 ZMYM6O95789 1325 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 FAM196BA6NMK8 535 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 USP17L12C9JPN9 530 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 USP17L21D6R901 530 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 MFAP1P55081 439 aaKnown RBP26.4■■□□□ 1.82
RAB40B-207ENST00000572603 SBK1Q52WX2 424 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 DCAF15Q66K64 600 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 MIGA2Q7L4E1 593 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 CREBZFQ9NS37 354 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 PI4KBQ9UBF8 816 aa26.4■■□□□ 1.82
RAB40B-207ENST00000572603 ARPP21Q9UBL0 812 aaPredicted RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms