RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 DAGLAQ9Y4D2 1042 aa14.23□□□□□ -0.13
CHMP6-202ENST00000571457 NFIAQ12857 509 aa14.22□□□□□ -0.13
CHMP6-202ENST00000571457 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
CHMP6-202ENST00000571457 RABL6Q3YEC7 729 aaPredicted RBP14.22□□□□□ -0.13
CHMP6-202ENST00000571457 BICC1Q9H694 974 aaKnown RBP14.22□□□□□ -0.13
CHMP6-202ENST00000571457 UNC80Q8N2C7 3258 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 UTYO14607 1347 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.13
CHMP6-202ENST00000571457 PTPRAP18433 802 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 C7orf61Q8IZ16 206 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.21□□□□□ -0.131e-6■■■■■ 42.5
CHMP6-202ENST00000571457 USP40Q9NVE5 1235 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 FAM198AQ9UFP1 575 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 PNMA3Q9UL41 463 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 AFG3L2Q9Y4W6 797 aa14.21□□□□□ -0.13
CHMP6-202ENST00000571457 LRRFIP2Q9Y608 721 aaKnown RBP14.21□□□□□ -0.13
CHMP6-202ENST00000571457 PHF20L1A8MW92 1017 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 LDHBP07195 334 aaKnown RBP14.2□□□□□ -0.14
CHMP6-202ENST00000571457 SLC5A1P13866 664 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 FGFR2P21802 821 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 DIXDC1Q155Q3 683 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 LPIN2Q92539 896 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 NBPF3Q9H094 633 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 DOCK3Q8IZD9 2030 aa14.2□□□□□ -0.14
CHMP6-202ENST00000571457 CTNND1O60716 968 aaKnown RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 ENTPD3O75355 529 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 HMGCRP04035 888 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 FAM110CQ1W6H9 321 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 ZSCAN29Q8IWY8 852 aaPredicted RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 TDHQ8IZJ6 230 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 ANKRD13CQ8N6S4 541 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 DIS3LQ8TF46 1054 aaKnown RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 HMX1Q9NP08 348 aaPredicted RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 GNL3LQ9NVN8 582 aaKnown RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 MTMR10Q9NXD2 777 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 ZMYND8Q9ULU4 1186 aaPredicted RBP14.19□□□□□ -0.14
CHMP6-202ENST00000571457 AGTPBP1Q9UPW5 1226 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 ALPK3Q96L96 1907 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 MYH13Q9UKX3 1938 aa14.19□□□□□ -0.14
CHMP6-202ENST00000571457 Q7L0L9 218 aa14.18□□□□□ -0.14
CHMP6-202ENST00000571457 ZFPM1Q8IX07 1006 aa14.18□□□□□ -0.14
CHMP6-202ENST00000571457 ANKRD44Q8N8A2 993 aa14.18□□□□□ -0.14
CHMP6-202ENST00000571457 IDI2Q9BXS1 227 aa14.18□□□□□ -0.14
CHMP6-202ENST00000571457 ATRNL1Q5VV63 1379 aa14.18□□□□□ -0.14
CHMP6-202ENST00000571457 RPTORQ8N122 1335 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 TTC28Q96AY4 2481 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 TRIM75PA6NK02 468 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 PRDX5P30044 214 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 MAGEA10P43363 369 aaPredicted RBP14.17□□□□□ -0.14
CHMP6-202ENST00000571457 GCLCP48506 637 aaPredicted RBP14.17□□□□□ -0.14
CHMP6-202ENST00000571457 RGS3P49796 1198 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 MAP3K10Q02779 954 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 KLHDC4Q8TBB5 520 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 UBE2OQ9C0C9 1292 aaKnown RBP14.17□□□□□ -0.14
CHMP6-202ENST00000571457 C11orf49Q9H6J7 331 aa14.17□□□□□ -0.14
CHMP6-202ENST00000571457 SALL1Q9NSC2 1324 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 DOCK2Q92608 1830 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 PTPRFP10586 1907 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 EYA2O00167 538 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 SEMA3EO15041 775 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 PABPC4Q13310 644 aaKnown RBP eCLIP14.16□□□□□ -0.14
CHMP6-202ENST00000571457 SLF2Q8IX21 1173 aa14.16□□□□□ -0.14
CHMP6-202ENST00000571457 ZGPATQ8N5A5 531 aaKnown RBP14.16□□□□□ -0.14
CHMP6-202ENST00000571457 PROCA1Q8NCQ7 364 aaPredicted RBP14.16□□□□□ -0.14
CHMP6-202ENST00000571457 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CHMP6-202ENST00000571457 SYN1P17600 705 aa14.15□□□□□ -0.14
CHMP6-202ENST00000571457 DENND2AQ9ULE3 1009 aa14.15□□□□□ -0.14
CHMP6-202ENST00000571457 COL25A1Q9BXS0 654 aaPredicted RBP14.14□□□□□ -0.15
CHMP6-202ENST00000571457 TBC1D2Q9BYX2 928 aa14.14□□□□□ -0.15
CHMP6-202ENST00000571457 OGDHLQ9ULD0 1010 aa14.14□□□□□ -0.15
CHMP6-202ENST00000571457 SALL2Q9Y467 1007 aaPredicted RBP14.14□□□□□ -0.15
CHMP6-202ENST00000571457 DOCK1Q14185 1865 aa14.14□□□□□ -0.15
CHMP6-202ENST00000571457 ATP2B3Q16720 1220 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 TREML2Q5T2D2 321 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 SH3BP5LQ7L8J4 393 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.13□□□□□ -0.15
CHMP6-202ENST00000571457 FBXO3Q9UK99 471 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 GJD2Q9UKL4 321 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 GAKO14976 1311 aa14.13□□□□□ -0.15
CHMP6-202ENST00000571457 DDTLA6NHG4 134 aaPredicted RBP14.12□□□□□ -0.15
CHMP6-202ENST00000571457 TBC1D12O60347 775 aa14.12□□□□□ -0.15
CHMP6-202ENST00000571457 CCDC184Q52MB2 194 aa14.12□□□□□ -0.15
CHMP6-202ENST00000571457 DZIP1Q86YF9 867 aaKnown RBP14.12□□□□□ -0.15
CHMP6-202ENST00000571457 TRMT44Q8IYL2 757 aaKnown RBP14.12□□□□□ -0.15
CHMP6-202ENST00000571457 ZNF280CQ8ND82 737 aa14.12□□□□□ -0.15
CHMP6-202ENST00000571457 FAM163AQ96GL9 167 aaPredicted RBP14.12□□□□□ -0.15
CHMP6-202ENST00000571457 CEP126Q9P2H0 1117 aa14.12□□□□□ -0.15
CHMP6-202ENST00000571457 PHIPQ8WWQ0 1821 aa14.12□□□□□ -0.15
CHMP6-202ENST00000571457 DDX60LQ5H9U9 1706 aaKnown RBP14.12□□□□□ -0.15
CHMP6-202ENST00000571457 MYH2Q9UKX2 1941 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 RFX7Q2KHR2 1363 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 LAMA2P24043 3122 aaKnown RBP14.11□□□□□ -0.15
CHMP6-202ENST00000571457 ZBTB22O15209 634 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 SPP2Q13103 211 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 PICALMQ13492 652 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 SPTY2D1Q68D10 685 aaPredicted RBP14.11□□□□□ -0.15
CHMP6-202ENST00000571457 FAM109BQ6ICB4 259 aaPredicted RBP14.11□□□□□ -0.15
CHMP6-202ENST00000571457 ATG9AQ7Z3C6 839 aa14.11□□□□□ -0.15
CHMP6-202ENST00000571457 OSBPL5Q9H0X9 879 aaPredicted RBP14.11□□□□□ -0.15
CHMP6-202ENST00000571457 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.11□□□□□ -0.158e-10■■■■■ 55.9
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms