RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 VIL1P09327 827 aaKnown RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 CXCL9Q07325 125 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 MFSD14BQ5SR56 506 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 L1TD1Q5T7N2 865 aaKnown RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 TMEM87AQ8NBN3 555 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 NBPF3Q9H094 633 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 NAPBQ9H115 298 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 EPB41L4AQ9HCS5 686 aaPredicted RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 FSD2A1L4K1 749 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 GSG1L2A8MUP6 293 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 RAD17O75943 681 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 MBD3O95983 291 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 PDIA3P30101 505 aaKnown RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 HMGN5P82970 282 aaKnown RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 SPTY2D1Q68D10 685 aaPredicted RBP20.37■□□□□ 0.85
RPAIN-208ENST00000571043 TBC1D10CQ8IV04 446 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 LCORLQ8N3X6 602 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 SUGT1Q9Y2Z0 365 aa20.37■□□□□ 0.85
RPAIN-208ENST00000571043 ANTXR2P58335 489 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 CERS5Q8N5B7 392 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 FBXW7Q969H0 707 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 RNF181Q9P0P0 153 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 SLC4A4Q9Y6R1 1079 aa20.36■□□□□ 0.85
RPAIN-208ENST00000571043 VPS37CA5D8V6 355 aaPredicted RBP20.35■□□□□ 0.85
RPAIN-208ENST00000571043 GOLGA6L3A6NEY3 463 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 PSMD14O00487 310 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 PRDX5P30044 214 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 TNIP1Q15025 636 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 CIAPIN1Q6FI81 312 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 CHST3Q7LGC8 479 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 NSUN7Q8NE18 718 aaKnown RBP20.35■□□□□ 0.85
RPAIN-208ENST00000571043 KIF3AQ9Y496 699 aa20.35■□□□□ 0.85
RPAIN-208ENST00000571043 MAGEB6P1A0A0J9YX57 407 aa20.34■□□□□ 0.85
RPAIN-208ENST00000571043 LDHBP07195 334 aaKnown RBP20.34■□□□□ 0.85
RPAIN-208ENST00000571043 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
RPAIN-208ENST00000571043 GRIK5Q16478 980 aa20.34■□□□□ 0.85
RPAIN-208ENST00000571043 GPT2Q8TD30 523 aa20.34■□□□□ 0.85
RPAIN-208ENST00000571043 MXD3Q9BW11 206 aa20.34■□□□□ 0.85
RPAIN-208ENST00000571043 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
RPAIN-208ENST00000571043 JAK2O60674 1132 aa20.33■□□□□ 0.85
RPAIN-208ENST00000571043 CSPP1Q1MSJ5 1256 aa20.33■□□□□ 0.85
RPAIN-208ENST00000571043 NAA16Q6N069 864 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-208ENST00000571043 RSBN1LQ6PCB5 846 aaPredicted RBP20.33■□□□□ 0.85
RPAIN-208ENST00000571043 TMEM87BQ96K49 555 aa20.33■□□□□ 0.85
RPAIN-208ENST00000571043 CNNM2Q9H8M5 875 aa20.33■□□□□ 0.85
RPAIN-208ENST00000571043 PRKAB2O43741 272 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 TDO2P48775 406 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 ADGRA1Q86SQ6 560 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 MIGA1Q8NAN2 632 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 FAM184AQ8NB25 1140 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 ZNF384Q8TF68 577 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 NSUN4Q96CB9 384 aaKnown RBP20.32■□□□□ 0.84
RPAIN-208ENST00000571043 GMLQ99445 158 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 RIOK1Q9BRS2 568 aaKnown RBP20.32■□□□□ 0.84
RPAIN-208ENST00000571043 MYH2Q9UKX2 1941 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 MYO3BQ8WXR4 1341 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 DHX16O60231 1041 aaKnown RBP20.32■□□□□ 0.84
RPAIN-208ENST00000571043 NCLP19338 710 aaKnown RBP20.32■□□□□ 0.84
RPAIN-208ENST00000571043 MECOMQ03112 1051 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 USP48Q86UV5 1035 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 AGBL3Q8NEM8 1001 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 STAG1Q8WVM7 1258 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 KRT23Q9C075 422 aa20.32■□□□□ 0.84
RPAIN-208ENST00000571043 PTPDC1A2A3K4 754 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 CTDNEP1O95476 244 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 AKNAD1Q5T1N1 836 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 GIMAP6Q6P9H5 292 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 MTA3Q9BTC8 594 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 MRIQ9BWK5 157 aa20.31■□□□□ 0.84
RPAIN-208ENST00000571043 ANGEL1Q9UNK9 670 aaKnown RBP20.31■□□□□ 0.84
RPAIN-208ENST00000571043 KLF18A0A0U1RQI7 1052 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 SH2B2O14492 632 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 DTNBO60941 627 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 CCT2P78371 535 aaKnown RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 FOXD4L6Q3SYB3 417 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 FOXD4L3Q6VB84 417 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 CYB5R4Q7L1T6 521 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 RNF41Q9H4P4 317 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 GPHNQ9NQX3 736 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 ANAPC4Q9UJX5 808 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 BRPF3Q9ULD4 1205 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 CNPY2Q9Y2B0 182 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 ZBTB12Q9Y330 459 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-208ENST00000571043 ZNF541Q9H0D2 1346 aa20.3■□□□□ 0.84
RPAIN-208ENST00000571043 TIAM2Q8IVF5 1701 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 B4E1Z4 1266 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 ZNF445P59923 1031 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 CAVIN1Q6NZI2 390 aaKnown RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 MFSD6Q6ZSS7 791 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 DZIP1Q86YF9 867 aaKnown RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 GPC2Q8N158 579 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 FAM163AQ96GL9 167 aaPredicted RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 NAP1L2Q9ULW6 460 aaPredicted RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 TTF2Q9UNY4 1162 aaKnown RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 NEDD4P46934 1319 aa20.29■□□□□ 0.84
RPAIN-208ENST00000571043 ZC3H4Q9UPT8 1303 aaKnown RBP20.29■□□□□ 0.84
RPAIN-208ENST00000571043 RPS12P25398 132 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms