RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 VPS33BQ9H267 617 aa7.79□□□□□ -1.16
TOM1L1-208ENST00000570977 PCDHB11Q9Y5F2 797 aa7.79□□□□□ -1.16
TOM1L1-208ENST00000570977 HEG1Q9ULI3 1381 aa7.79□□□□□ -1.16
TOM1L1-208ENST00000570977 FIGNL2A6NMB9 653 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 TRPA1O75762 1119 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 ADH1AP07327 375 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 HOXA10P31260 410 aaPredicted RBP7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 HIRAP54198 1017 aaPredicted RBP7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 HUNKP57058 714 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 KIF23Q02241 960 aaPredicted RBP7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 RGMBQ6NW40 437 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 TTC5Q8N0Z6 440 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 LARGE2Q8N3Y3 721 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 COL4A5P29400 1685 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 CACNA1SQ13698 1873 aa7.78□□□□□ -1.16
TOM1L1-208ENST00000570977 FXR1P51114 621 aaKnown RBP eCLIP7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 CXCL9Q07325 125 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 MTHFSDQ2M296 383 aaKnown RBP7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 RNF20Q5VTR2 975 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 GLMNQ92990 594 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 CSRNP1Q96S65 589 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 INSM2Q96T92 566 aaPredicted RBP7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 POLMQ9NP87 494 aaPredicted RBP7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 CDHR2Q9BYE9 1310 aa7.77□□□□□ -1.17
TOM1L1-208ENST00000570977 SCN7AQ01118 1682 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 TTLL8A6PVC2 850 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 SPINT1O43278 529 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 WFS1O76024 890 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 CTSOP43234 321 aaPredicted RBP7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 SCTRP47872 440 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 MCCD1P59942 119 aaPredicted RBP7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 NFX1Q12986 1120 aaKnown RBP7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 TREML4Q6UXN2 200 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 NIM1KQ8IY84 436 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 IPO4Q8TEX9 1081 aaKnown RBP7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 FMNL2Q96PY5 1086 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 ZNF408Q9H9D4 720 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 CEP126Q9P2H0 1117 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 ZNRF3Q9ULT6 936 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 ZNF652Q9Y2D9 606 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 KIF7Q2M1P5 1343 aa7.76□□□□□ -1.17
TOM1L1-208ENST00000570977 NPC1L1Q9UHC9 1359 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 GMPSP49915 693 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 NOM1Q5C9Z4 860 aaKnown RBP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 GORABQ5T7V8 394 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 IL17REQ8NFR9 667 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 CCDC85AQ96PX6 553 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 CRAMP1Q96RY5 1269 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 GBA2Q9HCG7 927 aaPredicted RBP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 NIP7Q9Y221 180 aaKnown RBP eCLIP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 LAS1LQ9Y4W2 734 aaKnown RBP7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 USP16Q9Y5T5 823 aa7.75□□□□□ -1.17
TOM1L1-208ENST00000570977 BCORQ6W2J9 1755 aa7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 UBR2Q8IWV8 1755 aa7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 PTGIRP43119 386 aa7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 ZNF157P51786 506 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 WASHC4Q2M389 1173 aa7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 SPTY2D1Q68D10 685 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 C2orf69Q8N8R5 385 aa7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 KDF1Q8NAX2 398 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 RTFDC1Q9BY42 306 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 NXF1Q9UBU9 619 aaKnown RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 NAP1L2Q9ULW6 460 aaPredicted RBP7.74□□□□□ -1.17
TOM1L1-208ENST00000570977 ATP5J2-PTCD1G3V325 749 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 PPIP5K2O43314 1243 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 MARCH6O60337 910 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 ERVK-9P63128 1117 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 TEFQ10587 303 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 TNIP1Q15025 636 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 SLFNL1Q499Z3 407 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 LCE2CQ5TA81 110 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 FBXO46Q6PJ61 603 aaPredicted RBP7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 RNF135Q8IUD6 432 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 TRPM4Q8TD43 1214 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 DPF2Q92785 391 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 YTHDC1Q96MU7 727 aaKnown RBP7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 IGSF5Q9NSI5 407 aa7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 CNOT7Q9UIV1 285 aaKnown RBP7.73□□□□□ -1.17
TOM1L1-208ENST00000570977 H7C1D1 291 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 MEN1O00255 615 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 DLL1O00548 723 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 TPD52L2O43399 206 aaKnown RBP7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 GTF2E1P29083 439 aaPredicted RBP7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 SEMA3FQ13275 785 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 HLFQ16534 295 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 AOC3Q16853 763 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 TSGA10IPQ3SY00 556 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 DLK2Q6UY11 383 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 MORC1Q86VD1 984 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 SUPT20HQ8NEM7 779 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 ZNF296Q8WUU4 475 aaPredicted RBP7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 NYXQ9GZU5 481 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 HDAC9Q9UKV0 1011 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 DOLKQ9UPQ8 538 aa7.72□□□□□ -1.17
TOM1L1-208ENST00000570977 RIC1Q4ADV7 1423 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms