RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
MAP1LC3B-208ENST00000570189 SNAPC2Q13487 334 aa21■□□□□ 0.95
MAP1LC3B-208ENST00000570189 CCDC158Q5M9N0 1113 aa21■□□□□ 0.95
MAP1LC3B-208ENST00000570189 MIGA2Q7L4E1 593 aa21■□□□□ 0.95
MAP1LC3B-208ENST00000570189 KCNH4Q9UQ05 1017 aa21■□□□□ 0.95
MAP1LC3B-208ENST00000570189 IRF6O14896 467 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 INPP5BP32019 993 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 OS9Q13438 667 aaPredicted RBP20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ZFPM1Q8IX07 1006 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 PANK1Q8TE04 598 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ERO1AQ96HE7 468 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DBNDD2Q9BQY9 259 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 HPS5Q9UPZ3 1129 aa20.99■□□□□ 0.95
MAP1LC3B-208ENST00000570189 PHF20L1A8MW92 1017 aa20.98■□□□□ 0.95
MAP1LC3B-208ENST00000570189 SH3BP5LQ7L8J4 393 aa20.98■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DDX4Q9NQI0 724 aaKnown RBP20.98■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.98■□□□□ 0.95
MAP1LC3B-208ENST00000570189 TBC1D12O60347 775 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 TTC39AQ5SRH9 613 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 TBC1D9Q6ZT07 1266 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ERC1Q8IUD2 1116 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 FAM43AQ8N2R8 423 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ZFYVE28Q9HCC9 887 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DBNLQ9UJU6 430 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DDX19BQ9UMR2 479 aa20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 RBBP6Q7Z6E9 1792 aaKnown RBP20.97■□□□□ 0.95
MAP1LC3B-208ENST00000570189 SP3Q02447 781 aa20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 TAF1CQ15572 869 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 HSP90AB4PQ58FF6 505 aa20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 TMED8Q6PL24 325 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 OTOP1Q7RTM1 612 aa20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 RPAP2Q8IXW5 612 aaPredicted RBP20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 ATAD5Q96QE3 1844 aa20.96■□□□□ 0.95
MAP1LC3B-208ENST00000570189 DDTLA6NHG4 134 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 BTBD19C9JJ37 291 aa20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CYP2E1P05181 493 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 MLLT1Q03111 559 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 EAF2Q96CJ1 260 aaPredicted RBP20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CHMP4BQ9H444 224 aaKnown RBP20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ZBTB40Q9NUA8 1239 aa20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 RAI14Q9P0K7 980 aa20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 LRP2BPQ9P2M1 347 aa20.95■□□□□ 0.94
MAP1LC3B-208ENST00000570189 SIPA1L1O43166 1804 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 TNRC18O15417 2968 aaPredicted RBP20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CXCL11O14625 94 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 TLR2O60603 784 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PPP4CP60510 307 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ANKRD23Q86SG2 305 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 SCYL3Q8IZE3 742 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 RCAN3Q9UKA8 241 aa20.94■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CTNND1O60716 968 aaKnown RBP20.93■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PLCG2P16885 1265 aa20.93■□□□□ 0.94
MAP1LC3B-208ENST00000570189 MOGSQ13724 837 aa20.93■□□□□ 0.94
MAP1LC3B-208ENST00000570189 NAA16Q6N069 864 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3B-208ENST00000570189 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3B-208ENST00000570189 OSBPL5Q9H0X9 879 aaPredicted RBP20.92■□□□□ 0.94
MAP1LC3B-208ENST00000570189 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
MAP1LC3B-208ENST00000570189 TRIM17Q9Y577 477 aa20.92■□□□□ 0.94
MAP1LC3B-208ENST00000570189 BAG3O95817 575 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PTPRAP18433 802 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PICALMQ13492 652 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PDE3AQ14432 1141 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ARHGEF6Q15052 776 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ZSCAN29Q8IWY8 852 aaPredicted RBP20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CD99L2Q8TCZ2 262 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 EXOC6BQ9Y2D4 811 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 PTPN22Q9Y2R2 807 aa20.91■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CENPFP49454 3210 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ADGRA2Q96PE1 1338 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 HMMRO75330 724 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 ZAP70P43403 619 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CERS3Q8IU89 383 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 NOL10Q9BSC4 688 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 CCDC8Q9H0W5 538 aaPredicted RBP20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 DHX36Q9H2U1 1008 aaKnown RBP20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 EFCC1Q9HA90 598 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 SNRKQ9NRH2 765 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
MAP1LC3B-208ENST00000570189 MYH1P12882 1939 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 A0A0G2JLL6 359 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 GNRH1P01148 92 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PRRT2Q7Z6L0 340 aaPredicted RBP20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 TEX11Q8IYF3 940 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 RHPN1Q8TCX5 695 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PICK1Q9NRD5 415 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 HERC5Q9UII4 1024 aaKnown RBP20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 COG6Q9Y2V7 657 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 SLC45A1Q9Y2W3 748 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 AFG3L2Q9Y4W6 797 aa20.89■□□□□ 0.93
MAP1LC3B-208ENST00000570189 CAP1Q01518 475 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 C17orf99Q6UX52 265 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 ADGRA1Q86SQ6 560 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 METTL16Q86W50 562 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 SIRT2Q8IXJ6 389 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 KIF1BPQ96EK5 621 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 TBC1D2Q9BYX2 928 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 PIH1D3Q9NQM4 214 aaKnown RBP20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 ZHX2Q9Y6X8 837 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 MGAMO43451 1857 aa20.88■□□□□ 0.93
MAP1LC3B-208ENST00000570189 GPAT2Q6NUI2 795 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms