RNA–Protein interactions for RNA: ENST00000569961.5

CCDC187-203, Transcript of coiled-coil domain containing 187, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC187, Length 3,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-203ENST00000569961 TSGA10IPQ3SY00 556 aa16.41■□□□□ 0.22
CCDC187-203ENST00000569961 CLEC4GQ6UXB4 293 aa16.41■□□□□ 0.22
CCDC187-203ENST00000569961 SYNE3Q6ZMZ3 975 aa16.41■□□□□ 0.22
CCDC187-203ENST00000569961 BTBD18B2RXH4 712 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 GTF2IP78347 998 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
CCDC187-203ENST00000569961 DRC7Q8IY82 874 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 GOLPH3LQ9H4A5 285 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 VPS54Q9P1Q0 977 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 FAM196BA6NMK8 535 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 DDR1Q08345 913 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
CCDC187-203ENST00000569961 UBR2Q8IWV8 1755 aa16.4■□□□□ 0.22
CCDC187-203ENST00000569961 ZNF445P59923 1031 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 ANO6Q4KMQ2 910 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 FBXO3Q9UK99 471 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 PCDHAC2Q9Y5I4 1007 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 TNKSO95271 1327 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 LAMB4A4D0S4 1761 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 USP17L3A6NCW0 530 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 USP17L4A6NCW7 530 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 TSPY2A6NKD2 308 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 ESPNB1AK53 854 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 PLEKHA8P1O95397 391 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 PTMSP20962 102 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 USP17L1Q7RTZ2 530 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 OXER1Q8TDS5 423 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 SH3RF3Q8TEJ3 882 aaPredicted RBP16.39■□□□□ 0.21
CCDC187-203ENST00000569961 NYXQ9GZU5 481 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 DBNDD1Q9H9R9 158 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
CCDC187-203ENST00000569961 NUP188Q5SRE5 1749 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 KRT40Q6A162 431 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 LY9Q9HBG7 655 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 V9GY48 417 aaPredicted RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 SH2B2O14492 632 aaPredicted RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 EPB41L2O43491 1005 aaKnown RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 TM4SF1P30408 202 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 RBM10P98175 930 aaKnown RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 MMP10P09238 476 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 CHRNA5P30532 468 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 HOMER1Q86YM7 354 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 IGDCC4Q8TDY8 1250 aa16.38■□□□□ 0.21
CCDC187-203ENST00000569961 N4BP2Q86UW6 1770 aaPredicted RBP16.38■□□□□ 0.21
CCDC187-203ENST00000569961 ADCY5O95622 1261 aa16.37■□□□□ 0.21
CCDC187-203ENST00000569961 COL1A1P02452 1464 aaPredicted RBP16.37■□□□□ 0.21
CCDC187-203ENST00000569961 EN1Q05925 392 aaPredicted RBP16.37■□□□□ 0.21
CCDC187-203ENST00000569961 TCP10Q12799 353 aa16.37■□□□□ 0.21
CCDC187-203ENST00000569961 UBE4AQ14139 1066 aa16.37■□□□□ 0.21
CCDC187-203ENST00000569961 STAMQ92783 540 aa16.37■□□□□ 0.21
CCDC187-203ENST00000569961 NSUN4Q96CB9 384 aaKnown RBP16.37■□□□□ 0.21
CCDC187-203ENST00000569961 LDHBP07195 334 aaKnown RBP16.36■□□□□ 0.21
CCDC187-203ENST00000569961 MAP3K11Q16584 847 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 MFSD14BQ5SR56 506 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 CREBRFQ8IUR6 639 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 AP5Z1O43299 807 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 DHX16O60231 1041 aaKnown RBP16.36■□□□□ 0.21
CCDC187-203ENST00000569961 COBLO75128 1261 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 TRIM29Q14134 588 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 RTN1Q16799 776 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.36■□□□□ 0.21
CCDC187-203ENST00000569961 MKNK2Q9HBH9 465 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 GRIN1Q05586 938 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 IFIT1BQ5T764 474 aaKnown RBP16.36■□□□□ 0.21
CCDC187-203ENST00000569961 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
CCDC187-203ENST00000569961 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 PCDHA7Q9UN72 937 aa16.36■□□□□ 0.21
CCDC187-203ENST00000569961 AHDC1Q5TGY3 1603 aaPredicted RBP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 MSNP26038 577 aaKnown RBP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 PLCD1P51178 756 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 CCDC73Q6ZRK6 1079 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 ZNF274Q96GC6 653 aaPredicted RBP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 ABCC6O95255 1503 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 CDC25AP30304 524 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 HMGN5P82970 282 aaKnown RBP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 DEFB132Q7Z7B7 95 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 FBXO18Q8NFZ0 1043 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 SMARCC2Q8TAQ2 1214 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 GPKOWQ92917 476 aaPredicted RBP eCLIP16.35■□□□□ 0.21
CCDC187-203ENST00000569961 SPEF2Q9C093 1822 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
CCDC187-203ENST00000569961 NDUFA8P51970 172 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 ST5P78524 1137 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 TYRO3Q06418 890 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 SART3Q15020 963 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 ZNF654Q8IZM8 581 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 CABP5Q9NP86 173 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 CASP1P29466 404 aa16.34■□□□□ 0.21
CCDC187-203ENST00000569961 AKAP17AQ02040 695 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 CPLX2Q6PUV4 134 aaKnown RBP16.34■□□□□ 0.21
CCDC187-203ENST00000569961 SASS6Q6UVJ0 657 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms