RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ZSCAN29Q8IWY8 852 aaPredicted RBP15.04■□□□□ -0
CAPN3-220ENST00000569827 DPF3Q92784 378 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 DDX4Q9NQI0 724 aaKnown RBP15.04■□□□□ -0
CAPN3-220ENST00000569827 CEP126Q9P2H0 1117 aa15.04■□□□□ -0
CAPN3-220ENST00000569827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.04■□□□□ -0
CAPN3-220ENST00000569827 PLXNB2O15031 1838 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
CAPN3-220ENST00000569827 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 GNRH1P01148 92 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 BCRP11274 1271 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 CCDC102BQ68D86 513 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 PARK7Q99497 189 aaKnown RBP15.03■□□□□ -0
CAPN3-220ENST00000569827 MEIS3Q99687 375 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 RNF208Q9H0X6 261 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 ABCF2Q9UG63 623 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 NOB1Q9ULX3 412 aaKnown RBP15.03■□□□□ -0
CAPN3-220ENST00000569827 ZHX2Q9Y6X8 837 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 FOCADQ5VW36 1801 aa15.03■□□□□ -0
CAPN3-220ENST00000569827 ELNP15502 786 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 PRMT2P55345 433 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 TIMM10P62072 90 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 RASGRF1Q13972 1273 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 DZIP1Q86YF9 867 aaKnown RBP15.02■□□□□ -0
CAPN3-220ENST00000569827 SCYL3Q8IZE3 742 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 UNC93B1Q9H1C4 597 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 GNL3LQ9NVN8 582 aaKnown RBP15.02■□□□□ -0
CAPN3-220ENST00000569827 TAOK2Q9UL54 1235 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 DENND2AQ9ULE3 1009 aa15.02■□□□□ -0
CAPN3-220ENST00000569827 MAST2Q6P0Q8 1798 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 GAKO14976 1311 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 SALL1Q9NSC2 1324 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 A0A0G2JLL6 359 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-220ENST00000569827 TRIM75PA6NK02 468 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 CIAO1O76071 339 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 PTPRAP18433 802 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 HOXD10P28358 340 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 BTDP43251 543 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 FCGRTP55899 365 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 PI16Q6UXB8 463 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 PRRT2Q7Z6L0 340 aaPredicted RBP15.01□□□□□ -0.01
CAPN3-220ENST00000569827 PICK1Q9NRD5 415 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 RBM27Q9P2N5 1060 aaKnown RBP15.01□□□□□ -0.01
CAPN3-220ENST00000569827 COL6A3P12111 3177 aa15.01□□□□□ -0.01
CAPN3-220ENST00000569827 IL15P40933 162 aaPredicted RBP15□□□□□ -0.01
CAPN3-220ENST00000569827 ALDH1L2Q3SY69 923 aa15□□□□□ -0.01
CAPN3-220ENST00000569827 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
CAPN3-220ENST00000569827 DDX60LQ5H9U9 1706 aaKnown RBP15□□□□□ -0.01
CAPN3-220ENST00000569827 CXCL11O14625 94 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 ADCY3O60266 1144 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 GJA8P48165 433 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 FLT3LGP49771 235 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 TFCP2Q12800 502 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 TREML2Q5T2D2 321 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 ZNF384Q8TF68 577 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 U2AF1L4Q8WU68 220 aaKnown RBP14.99□□□□□ -0.01
CAPN3-220ENST00000569827 IDI2Q9BXS1 227 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 TNNQ9UQP3 1299 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 MYH1P12882 1939 aa14.99□□□□□ -0.01
CAPN3-220ENST00000569827 MROH7-TTC4A0A0A0MT08 1334 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 A0A1B0GUL7 405 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 SEMA3EO15041 775 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 ENTPD3O75355 529 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 FARP2O94887 1054 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-220ENST00000569827 INHAP05111 366 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 GJB1P08034 283 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 UBXN2AP68543 259 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 MECOMQ03112 1051 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 UBE2Q1Q7Z7E8 422 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 SMCR8Q8TEV9 937 aaPredicted RBP14.98□□□□□ -0.01
CAPN3-220ENST00000569827 XAGE2Q96GT9 111 aa14.98□□□□□ -0.01
CAPN3-220ENST00000569827 FRMPD3Q5JV73 1810 aa14.97□□□□□ -0.01
CAPN3-220ENST00000569827 TNPO2O14787 897 aaKnown RBP14.97□□□□□ -0.01
CAPN3-220ENST00000569827 ANKRD13CQ8N6S4 541 aa14.97□□□□□ -0.01
CAPN3-220ENST00000569827 SLAIN1Q8ND83 568 aa14.97□□□□□ -0.01
CAPN3-220ENST00000569827 COPRSQ9NQ92 184 aa14.97□□□□□ -0.01
CAPN3-220ENST00000569827 FBXO3Q9UK99 471 aa14.97□□□□□ -0.01
CAPN3-220ENST00000569827 RHBDL3P58872 404 aa14.96□□□□□ -0.01
CAPN3-220ENST00000569827 RRP1BQ14684 758 aaKnown RBP14.96□□□□□ -0.01
CAPN3-220ENST00000569827 FASTKD5Q7L8L6 764 aaKnown RBP14.96□□□□□ -0.01
CAPN3-220ENST00000569827 ZGPATQ8N5A5 531 aaKnown RBP14.96□□□□□ -0.01
CAPN3-220ENST00000569827 NEUROD6Q96NK8 337 aa14.96□□□□□ -0.01
CAPN3-220ENST00000569827 DEFB118Q96PH6 123 aa14.96□□□□□ -0.01
CAPN3-220ENST00000569827 SRGAP3O43295 1099 aa14.95□□□□□ -0.02
CAPN3-220ENST00000569827 PEX10O60683 326 aa14.95□□□□□ -0.02
CAPN3-220ENST00000569827 ERICH6Q7L0X2 663 aa14.95□□□□□ -0.02
CAPN3-220ENST00000569827 NKX2-3Q8TAU0 364 aa14.95□□□□□ -0.02
CAPN3-220ENST00000569827 DIS3LQ8TF46 1054 aaKnown RBP14.95□□□□□ -0.02
CAPN3-220ENST00000569827 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN3-220ENST00000569827 HMG20BQ9P0W2 317 aa14.95□□□□□ -0.02
CAPN3-220ENST00000569827 CTNND1O60716 968 aaKnown RBP14.94□□□□□ -0.02
CAPN3-220ENST00000569827 SGPL1O95470 568 aa14.94□□□□□ -0.02
CAPN3-220ENST00000569827 MAP3K10Q02779 954 aa14.94□□□□□ -0.02
CAPN3-220ENST00000569827 TRIM32Q13049 653 aa14.94□□□□□ -0.02
CAPN3-220ENST00000569827 SPP2Q13103 211 aa14.94□□□□□ -0.02
CAPN3-220ENST00000569827 SHROOM1Q2M3G4 852 aaPredicted RBP14.94□□□□□ -0.02
CAPN3-220ENST00000569827 TRMT2AQ8IZ69 625 aaKnown RBP14.94□□□□□ -0.02
CAPN3-220ENST00000569827 HTATIP2Q9BUP3 242 aa14.94□□□□□ -0.02
CAPN3-220ENST00000569827 API5Q9BZZ5 524 aaKnown RBP14.94□□□□□ -0.02
CAPN3-220ENST00000569827 AGTPBP1Q9UPW5 1226 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms