RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LRRC4BQ9NT99 713 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 ANAPC4Q9UJX5 808 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 DENND2AQ9ULE3 1009 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 ANGEL1Q9UNK9 670 aaKnown RBP6.31□□□□□ -1.4
SF3B3-213ENST00000569687 TAF1LQ8IZX4 1826 aa6.31□□□□□ -1.4
SF3B3-213ENST00000569687 PTPDC1A2A3K4 754 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 SNAP23O00161 211 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 SH2B2O14492 632 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 KIF3CO14782 793 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 PLSCR1O15162 318 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 MBD4O95243 580 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 APPP05067 770 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 PCP11498 1178 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 GTF2E1P29083 439 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 NT5C2P49902 561 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 RCAN1P53805 252 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 HAND2P61296 217 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 FOXD4L6Q3SYB3 417 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 AKNAD1Q5T1N1 836 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 FOXD4L3Q6VB84 417 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 RBM43Q6ZSC3 357 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 C15orf52Q6ZUT6 534 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 NBPF5PQ86XG9 351 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 TBC1D10CQ8IV04 446 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 FBXO18Q8NFZ0 1043 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 OXER1Q8TDS5 423 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 CELF1Q92879 486 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 ZNF396Q96N95 335 aaPredicted RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 KRT23Q9C075 422 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 DDX19AQ9NUU7 478 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 LRP2BPQ9P2M1 347 aa6.3□□□□□ -1.4
SF3B3-213ENST00000569687 DDX60Q8IY21 1712 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 TNS1Q9HBL0 1735 aaKnown RBP6.3□□□□□ -1.4
SF3B3-213ENST00000569687 RGPD3A6NKT7 1758 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 RGPD4Q7Z3J3 1758 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 KLF18A0A0U1RQI7 1052 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 FIBPO43427 364 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 CDKL5O76039 1030 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 CYP7A1P22680 504 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 CCT2P78371 535 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 PPP2R5BQ15173 497 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 MFSD6Q6ZSS7 791 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 CYB5R4Q7L1T6 521 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 CHST3Q7LGC8 479 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 FERMT3Q86UX7 667 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 PDCD7Q8N8D1 485 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 STAG1Q8WVM7 1258 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 ARAP2Q8WZ64 1704 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 POM121Q96HA1 1249 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 PGBD1Q96JS3 809 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 RIOK1Q9BRS2 568 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 BRIP1Q9BX63 1249 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 NAPBQ9H115 298 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 RNF41Q9H4P4 317 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 ARMT1Q9H993 441 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 NCOA5Q9HCD5 579 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 EPB41L4AQ9HCS5 686 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 BMP2KQ9NSY1 1161 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 RTEL1Q9NZ71 1219 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 ZSWIM5Q9P217 1185 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 TFIP11Q9UBB9 837 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 ORC3Q9UBD5 711 aaPredicted RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 SRP68Q9UHB9 627 aaKnown RBP6.29□□□□□ -1.4
SF3B3-213ENST00000569687 LEMD3Q9Y2U8 911 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 NID2Q14112 1375 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 LAMB2P55268 1798 aa6.29□□□□□ -1.4
SF3B3-213ENST00000569687 IRS2Q9Y4H2 1338 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 C4AP0C0L4 1744 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 MAGEB6P1A0A0J9YX57 407 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 A0A1W2PQ27 194 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 A0A1W2PQ64 194 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 A0A1W2PQD8 194 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 B4E1Z4 1266 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 DTNBO60941 627 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 CAVIN2O95810 425 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 APBA3O96018 575 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 HOXA10P31260 410 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 RFC4P35249 363 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 GYG1P46976 350 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 NFIXQ14938 502 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 SKIV2LQ15477 1246 aaKnown RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 NTRK3Q16288 839 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 TXNRD1Q16881 649 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 FAM173BQ6P4H8 233 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 CPLX2Q6PUV4 134 aaKnown RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 BICDL1Q6ZP65 573 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 BRAPQ7Z569 592 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 AMIGO3Q86WK7 504 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 LCORLQ8N3X6 602 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 NKX2-3Q8TAU0 364 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 TMUB1Q9BVT8 246 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 LY9Q9HBG7 655 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 FAM217BQ9NTX9 383 aaPredicted RBP6.28□□□□□ -1.4
SF3B3-213ENST00000569687 TACC3Q9Y6A5 838 aa6.28□□□□□ -1.4
SF3B3-213ENST00000569687 SLC4A4Q9Y6R1 1079 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms