RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 B4GALNT3Q6L9W6 998 aa16.72■□□□□ 0.27
NEIL1-220ENST00000568881 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.72■□□□□ 0.27
NEIL1-220ENST00000568881 CCDC136Q96JN2 1154 aa16.72■□□□□ 0.27
NEIL1-220ENST00000568881 CLMNQ96JQ2 1002 aa16.72■□□□□ 0.27
NEIL1-220ENST00000568881 RNF186Q9NXI6 227 aa16.72■□□□□ 0.27
NEIL1-220ENST00000568881 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
NEIL1-220ENST00000568881 NPM3O75607 178 aaKnown RBP16.71■□□□□ 0.27
NEIL1-220ENST00000568881 CYP2E1P05181 493 aaPredicted RBP16.71■□□□□ 0.27
NEIL1-220ENST00000568881 RGS3P49796 1198 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 MAP3K12Q12852 859 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 NFIAQ12857 509 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 PICALMQ13492 652 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 ELP3Q9H9T3 547 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 FAM198AQ9UFP1 575 aa16.71■□□□□ 0.27
NEIL1-220ENST00000568881 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
NEIL1-220ENST00000568881 WDHD1O75717 1129 aaPredicted RBP16.7■□□□□ 0.26
NEIL1-220ENST00000568881 IDH1O75874 414 aaKnown RBP16.7■□□□□ 0.26
NEIL1-220ENST00000568881 VGLL4Q14135 290 aa16.7■□□□□ 0.26
NEIL1-220ENST00000568881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.7■□□□□ 0.26
NEIL1-220ENST00000568881 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
NEIL1-220ENST00000568881 GPATCH3Q96I76 525 aa16.7■□□□□ 0.26
NEIL1-220ENST00000568881 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 NUCB1Q02818 461 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.69■□□□□ 0.26
NEIL1-220ENST00000568881 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 ERO1BQ86YB8 467 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 TEX11Q8IYF3 940 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 LNPKQ9C0E8 428 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 PPP4R2Q9NY27 417 aa16.69■□□□□ 0.26
NEIL1-220ENST00000568881 GJA5P36382 358 aa16.68■□□□□ 0.26
NEIL1-220ENST00000568881 GTF2A2P52657 109 aa16.68■□□□□ 0.26
NEIL1-220ENST00000568881 CENPQQ7L2Z9 268 aaPredicted RBP16.68■□□□□ 0.26
NEIL1-220ENST00000568881 MIGA2Q7L4E1 593 aa16.68■□□□□ 0.26
NEIL1-220ENST00000568881 ZNF384Q8TF68 577 aa16.68■□□□□ 0.26
NEIL1-220ENST00000568881 OTOFQ9HC10 1997 aa16.68■□□□□ 0.26
NEIL1-220ENST00000568881 RFX7Q2KHR2 1363 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 SPDYE5A6NIY4 337 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 RHBDL3P58872 404 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 PPP4CP60510 307 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 OTUD5Q96G74 571 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 ECHDC1Q9NTX5 307 aa16.67■□□□□ 0.26
NEIL1-220ENST00000568881 AATFQ9NY61 560 aaKnown RBP eCLIP16.67■□□□□ 0.26
NEIL1-220ENST00000568881 COL2A1P02458 1487 aaPredicted RBP16.67■□□□□ 0.26
NEIL1-220ENST00000568881 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 ATP5JP18859 108 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 CYP7A1P22680 504 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 PPATQ06203 517 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 NOM1Q5C9Z4 860 aaKnown RBP16.66■□□□□ 0.26
NEIL1-220ENST00000568881 IFNL1Q8IU54 200 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 CFHR5Q9BXR6 569 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 TRIM34Q9BYJ4 488 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 OSBPL5Q9H0X9 879 aaPredicted RBP16.66■□□□□ 0.26
NEIL1-220ENST00000568881 DHX36Q9H2U1 1008 aaKnown RBP16.66■□□□□ 0.26
NEIL1-220ENST00000568881 PIH1D3Q9NQM4 214 aaKnown RBP16.66■□□□□ 0.26
NEIL1-220ENST00000568881 PICK1Q9NRD5 415 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 ZNF112Q9UJU3 913 aa16.66■□□□□ 0.26
NEIL1-220ENST00000568881 CETPP11597 493 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 MX1P20591 662 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 PPIL2Q13356 520 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 SNAPC2Q13487 334 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 NOL9Q5SY16 702 aaKnown RBP16.65■□□□□ 0.26
NEIL1-220ENST00000568881 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 MAGEB6Q8N7X4 407 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 ZKSCAN4Q969J2 545 aaPredicted RBP16.65■□□□□ 0.26
NEIL1-220ENST00000568881 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
NEIL1-220ENST00000568881 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.26
NEIL1-220ENST00000568881 R3HDMLQ9H3Y0 253 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 SNCAIPQ9Y6H5 919 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 CASP8AP2Q9UKL3 1982 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 DOCK2Q92608 1830 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 TTC41PQ6P2S7 1318 aa16.65■□□□□ 0.26
NEIL1-220ENST00000568881 ATRNL1Q5VV63 1379 aa16.64■□□□□ 0.26
NEIL1-220ENST00000568881 TESPA1A2RU30 521 aaPredicted RBP16.64■□□□□ 0.25
NEIL1-220ENST00000568881 ERC2O15083 957 aa16.64■□□□□ 0.25
NEIL1-220ENST00000568881 TBC1D12O60347 775 aa16.64■□□□□ 0.25
NEIL1-220ENST00000568881 TBC1D8O95759 1140 aa16.64■□□□□ 0.25
NEIL1-220ENST00000568881 SH3RF3Q8TEJ3 882 aaPredicted RBP16.64■□□□□ 0.25
NEIL1-220ENST00000568881 DDX4Q9NQI0 724 aaKnown RBP16.64■□□□□ 0.25
NEIL1-220ENST00000568881 CCL15-CCL14A0A0B4J2E2 113 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 GOLIM4O00461 696 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
NEIL1-220ENST00000568881 HLA-DOAP06340 250 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 INPP5BP32019 993 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 CCL15Q16663 113 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 OTUD7AQ8TE49 926 aaPredicted RBP16.63■□□□□ 0.25
NEIL1-220ENST00000568881 BOLA2Q9H3K6 86 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
NEIL1-220ENST00000568881 PI4KBQ9UBF8 816 aa16.63■□□□□ 0.25
NEIL1-220ENST00000568881 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
NEIL1-220ENST00000568881 LAMB1P07942 1786 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 DDTLA6NHG4 134 aaPredicted RBP16.62■□□□□ 0.25
NEIL1-220ENST00000568881 GLRX3O76003 335 aaKnown RBP16.62■□□□□ 0.25
NEIL1-220ENST00000568881 USP5P45974 858 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 MAP3K10Q02779 954 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 SLC9C2Q5TAH2 1124 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 ZSCAN25Q6NSZ9 544 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 SCYL3Q8IZE3 742 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 TGFBRAP1Q8WUH2 860 aa16.62■□□□□ 0.25
NEIL1-220ENST00000568881 ANTXR1Q9H6X2 564 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms