RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 NMRK2Q9NPI5 230 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 GGA3Q9NZ52 723 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 PGAP2Q9UHJ9 254 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 CDK5RAP2Q96SN8 1893 aa12.22□□□□□ -0.45
HERPUD1-216ENST00000568814 NAV1Q8NEY1 1877 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 FLT1P17948 1338 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 APPP05067 770 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 HSPD1P10809 573 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 ALX1Q15699 326 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 C8orf34Q49A92 452 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 ANGEL2Q5VTE6 544 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 TGFBRAP1Q8WUH2 860 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 DHX36Q9H2U1 1008 aaKnown RBP12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 DCP1AQ9NPI6 582 aaPredicted RBP12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 ANO2Q9NQ90 1003 aa12.21□□□□□ -0.45
HERPUD1-216ENST00000568814 DDX60LQ5H9U9 1706 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 GSG1L2A8MUP6 293 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 TCP10L2B9ZVM9 353 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 TDO2P48775 406 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 NFIAQ12857 509 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 PICALMQ13492 652 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 MAPKAPK5Q8IW41 473 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 SULF1Q8IWU6 871 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 SDR42E1Q8WUS8 393 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 FAM151AQ8WW52 585 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 NAPBQ9H115 298 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 IL25Q9H293 177 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 ARPP21Q9UBL0 812 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 MKRN1Q9UHC7 482 aaKnown RBP12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 CTNNA3Q9UI47 895 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 TAOK2Q9UL54 1235 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 CLEC11AQ9Y240 323 aa12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 U3KPZ7 1027 aaPredicted RBP12.2□□□□□ -0.46
HERPUD1-216ENST00000568814 ATRNL1Q5VV63 1379 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 PRKAB2O43741 272 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 HLA-DOAP06340 250 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 HSPA1AP0DMV8 641 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 HSPA1BP0DMV9 641 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 CACNB3P54284 484 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 HOOK2Q96ED9 719 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 LSG1Q9H089 658 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 EPB41L4AQ9HCS5 686 aaPredicted RBP12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 DDX4Q9NQI0 724 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 PCNTO95613 3336 aa12.19□□□□□ -0.46
HERPUD1-216ENST00000568814 CNTNAP1P78357 1384 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 ASTN2O75129 1339 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 MYH1P12882 1939 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 FOXP2O15409 715 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 POLR3DP05423 398 aaPredicted RBP12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 RASA3Q14644 834 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 SBK1Q52WX2 424 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 CDC37L1Q7L3B6 337 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 KRT26Q7Z3Y9 468 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 TTC6Q86TZ1 520 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 MAP4K1Q92918 833 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 DEFB129Q9H1M3 183 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 MCM9Q9NXL9 1143 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 LAMB1P07942 1786 aa12.18□□□□□ -0.46
HERPUD1-216ENST00000568814 FGAP02671 866 aa12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 TCP10Q12799 353 aa12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 IMMTQ16891 758 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 ZSCAN29Q8IWY8 852 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 EHD4Q9H223 541 aa12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 BAZ2AQ9UIF9 1905 aaKnown RBP12.17□□□□□ -0.46
HERPUD1-216ENST00000568814 LAMA4Q16363 1823 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 USP17L21D6R901 530 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 SLC3A2P08195 630 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 POTEJP0CG39 1038 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 MCCP23508 829 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 PTH1RQ03431 593 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 SUPT20HL1Q3ZLR7 823 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 C12orf60Q5U649 245 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 RNF20Q5VTR2 975 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 CHADLQ6NUI6 762 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 CTR9Q6PD62 1173 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 CSRNP1Q96S65 589 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 TMEM39BQ9GZU3 492 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 UPF2Q9HAU5 1272 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 PI4KBQ9UBF8 816 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 SAP30BPQ9UHR5 308 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 PALD1Q9ULE6 856 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 RBM8AQ9Y5S9 174 aaKnown RBP12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 ROBO3Q96MS0 1386 aa12.16□□□□□ -0.46
HERPUD1-216ENST00000568814 PCP11498 1178 aaKnown RBP12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 NF2P35240 595 aa12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 PPARAQ07869 468 aa12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 FOXP4Q8IVH2 680 aaPredicted RBP12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 TEPSINQ96N21 525 aa12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 TRIM34Q9BYJ4 488 aa12.15□□□□□ -0.46
HERPUD1-216ENST00000568814 BACH2Q9BYV9 841 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms