RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	DBNL	Q9UJU6	430 aa	Known RBP	12.64	□□□□□ -0.39
UBR1-207	ENST00000568782	MYO5A	Q9Y4I1	1855 aa	Known RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	CCL15-CCL14	A0A0B4J2E2	113 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	SPDYE5	A6NIY4	337 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	GPR25	O00155	361 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	FKTN	O75072	461 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	NPM3	O75607	178 aa	Known RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	IDH1	O75874	414 aa	Known RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	ZAP70	P43403	619 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	PPAT	Q06203	517 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	SNAPC2	Q13487	334 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	ARHGEF6	Q15052	776 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	PKN2	Q16513	984 aa	Known RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	CCL15	Q16663	113 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	NOM1	Q5C9Z4	860 aa	Known RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	CDAN1	Q8IWY9	1227 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	TEX11	Q8IYF3	940 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	ABHD8	Q96I13	439 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	PICK1	Q9NRD5	415 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	LAMB1	P07942	1786 aa		12.63	□□□□□ -0.39
UBR1-207	ENST00000568782	MAST2	Q6P0Q8	1798 aa		12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	CCDC85C	A6NKD9	419 aa		12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	CYP2E1	P05181	493 aa	Predicted RBP	12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	CTU1	Q7Z7A3	348 aa	Known RBP	12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	CFHR5	Q9BXR6	569 aa		12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	MCOLN1	Q9GZU1	580 aa		12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	ZFYVE28	Q9HCC9	887 aa		12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	AATF	Q9NY61	560 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
UBR1-207	ENST00000568782	TESPA1	A2RU30	521 aa	Predicted RBP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	CYP7A1	P22680	504 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	PPIL2	Q13356	520 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	TAF1C	Q15572	869 aa	Predicted RBP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	C20orf194	Q5TEA3	1177 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	GPATCH3	Q96I76	525 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	LRRCC1	Q9C099	1032 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	DHX36	Q9H2U1	1008 aa	Known RBP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	TLR7	Q9NYK1	1049 aa	Known RBP	12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	SNCAIP	Q9Y6H5	919 aa		12.61	□□□□□ -0.39
UBR1-207	ENST00000568782	INPP5B	P32019	993 aa		12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	GJA5	P36382	358 aa		12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	ZFPM1	Q8IX07	1006 aa		12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	ERO1A	Q96HE7	468 aa		12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	ZNF112	Q9UJU3	913 aa		12.6	□□□□□ -0.39
UBR1-207	ENST00000568782	DDTL	A6NHG4	134 aa	Predicted RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	IRF6	O14896	467 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	TBC1D12	O60347	775 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	CTNND1	O60716	968 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	HLA-DOA	P06340	250 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	USP5	P45974	858 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	RHBDL3	P58872	404 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	PPP4C	P60510	307 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	KIF22	Q14807	665 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	NOL9	Q5SY16	702 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	SCYL3	Q8IZE3	742 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	MAGEB6	Q8N7X4	407 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	TGFBRAP1	Q8WUH2	860 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	CNKSR2	Q8WXI2	1034 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	MS4A4A	Q96JQ5	239 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	DNAJC2	Q99543	621 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	OSBPL5	Q9H0X9	879 aa	Predicted RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	ZCCHC17	Q9NP64	241 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	DDX4	Q9NQI0	724 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	PI4KB	Q9UBF8	816 aa		12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	HERC5	Q9UII4	1024 aa	Known RBP	12.59	□□□□□ -0.39
UBR1-207	ENST00000568782	MYH1	P12882	1939 aa		12.58	□□□□□ -0.39
UBR1-207	ENST00000568782	SP3	Q02447	781 aa		12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	CRHR2	Q13324	411 aa		12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	FASTKD5	Q7L8L6	764 aa	Known RBP	12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	SIRT2	Q8IXJ6	389 aa		12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	PIH1D3	Q9NQM4	214 aa	Known RBP	12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	ZHX2	Q9Y6X8	837 aa		12.58	□□□□□ -0.4
UBR1-207	ENST00000568782	ATRNL1	Q5VV63	1379 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	DOCK1	Q14185	1865 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	CDK5RAP2	Q96SN8	1893 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	GOLIM4	O00461	696 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	CXCL11	O14625	94 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	RRP1	P56182	461 aa	Known RBP	12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	SLC9C2	Q5TAH2	1124 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	ZSCAN25	Q6NSZ9	544 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	FOXP4	Q8IVH2	680 aa	Predicted RBP	12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	ZNF384	Q8TF68	577 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	BRI3BP	Q8WY22	251 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	TBC1D2	Q9BYX2	928 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	AS3MT	Q9HBK9	375 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	COL2A1	P02458	1487 aa	Predicted RBP	12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	FOCAD	Q5VW36	1801 aa		12.57	□□□□□ -0.4
UBR1-207	ENST00000568782	ATAD5	Q96QE3	1844 aa		12.56	□□□□□ -0.4
UBR1-207	ENST00000568782	MAGEB6P1	A0A0J9YX57	407 aa		12.56	□□□□□ -0.4
UBR1-207	ENST00000568782	MAP3K10	Q02779	954 aa		12.56	□□□□□ -0.4
UBR1-207	ENST00000568782	TTC6	Q86TZ1	520 aa		12.56	□□□□□ -0.4
UBR1-207	ENST00000568782	MAPKAPK5	Q8IW41	473 aa		12.56	□□□□□ -0.4
UBR1-207	ENST00000568782	MIGA1	Q8NAN2	632 aa		12.56	□□□□□ -0.4

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