RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 ANGEL2Q5VTE6 544 aaKnown RBP9.19□□□□□ -0.94
SCAPER-221ENST00000568549 APOBEC3FQ8IUX4 373 aaKnown RBP9.19□□□□□ -0.94
SCAPER-221ENST00000568549 MAPKAPK5Q8IW41 473 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 IDI2Q9BXS1 227 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 GPBP1L1Q9HC44 474 aaPredicted RBP9.19□□□□□ -0.94
SCAPER-221ENST00000568549 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 ATP8A2Q9NTI2 1148 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 FLT1P17948 1338 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 RPAP1Q9BWH6 1393 aaPredicted RBP9.19□□□□□ -0.94
SCAPER-221ENST00000568549 SIPA1L1O43166 1804 aa9.19□□□□□ -0.94
SCAPER-221ENST00000568549 GSG1L2A8MUP6 293 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 FOXP2O15409 715 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 REC8O95072 547 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 YY1P25490 414 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 TDO2P48775 406 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 TNNI2P48788 182 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 TCP10Q12799 353 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 NFIAQ12857 509 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 TNFAIP1Q13829 316 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 FKBP1CQ5VVH2 108 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 GIMAP6Q6P9H5 292 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 IFNL3Q8IZI9 196 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 ZC3H15Q8WU90 426 aaKnown RBP9.18□□□□□ -0.94
SCAPER-221ENST00000568549 DCPSQ96C86 337 aaKnown RBP9.18□□□□□ -0.94
SCAPER-221ENST00000568549 DSCC1Q9BVC3 393 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 NACAP1Q9BZK3 213 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 EPB41L4AQ9HCS5 686 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-221ENST00000568549 DCP1AQ9NPI6 582 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-221ENST00000568549 DDX4Q9NQI0 724 aaKnown RBP9.18□□□□□ -0.94
SCAPER-221ENST00000568549 FAM198AQ9UFP1 575 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 CLEC11AQ9Y240 323 aa9.18□□□□□ -0.94
SCAPER-221ENST00000568549 COL2A1P02458 1487 aaPredicted RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 CNTNAP1P78357 1384 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 ZMYM6O95789 1325 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 ENTPD3O75355 529 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 NPM3O75607 178 aaKnown RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 PTH1RQ03431 593 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 AMOTL1Q8IY63 956 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 FAM151AQ8WW52 585 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 LSG1Q9H089 658 aaKnown RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 OSBPL5Q9H0X9 879 aaPredicted RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 NAPBQ9H115 298 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 MCM9Q9NXL9 1143 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 ARPP21Q9UBL0 812 aaPredicted RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 MKRN1Q9UHC7 482 aaKnown RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 SAP30BPQ9UHR5 308 aaKnown RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 SCAF8Q9UPN6 1271 aaKnown RBP9.17□□□□□ -0.94
SCAPER-221ENST00000568549 TRPM7Q96QT4 1865 aa9.17□□□□□ -0.94
SCAPER-221ENST00000568549 FGAP02671 866 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 POLR3DP05423 398 aaPredicted RBP9.16□□□□□ -0.94
SCAPER-221ENST00000568549 POTEIP0CG38 1075 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 POTEJP0CG39 1038 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 RASA3Q14644 834 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 ALX1Q15699 326 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 SLC4A8Q2Y0W8 1093 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 LDHDQ86WU2 507 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 SULF1Q8IWU6 871 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 ZSCAN29Q8IWY8 852 aaPredicted RBP9.16□□□□□ -0.94
SCAPER-221ENST00000568549 ZFPM1Q8IX07 1006 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 MAP4K1Q92918 833 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 DEFB129Q9H1M3 183 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 PGAP2Q9UHJ9 254 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 CTNNA3Q9UI47 895 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 PALD1Q9ULE6 856 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 PPP2R3BQ9Y5P8 575 aa9.16□□□□□ -0.94
SCAPER-221ENST00000568549 RBM8AQ9Y5S9 174 aaKnown RBP9.16□□□□□ -0.94
SCAPER-221ENST00000568549 ATRNL1Q5VV63 1379 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 ATAD5Q96QE3 1844 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 DDTLA6NHG4 134 aaPredicted RBP9.15□□□□□ -0.94
SCAPER-221ENST00000568549 MINDY4BA8MYZ0 360 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 ADM5C9JUS6 153 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 USP17L21D6R901 530 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 EPB41L2O43491 1005 aaKnown RBP9.15□□□□□ -0.94
SCAPER-221ENST00000568549 SEC24BO95487 1268 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 HLA-DOAP06340 250 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 SBK1Q52WX2 424 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 CTR9Q6PD62 1173 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 KRT26Q7Z3Y9 468 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 CSRNP1Q96S65 589 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 BACH2Q9BYV9 841 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 TMEM39BQ9GZU3 492 aa9.15□□□□□ -0.94
SCAPER-221ENST00000568549 DHX36Q9H2U1 1008 aaKnown RBP9.15□□□□□ -0.94
SCAPER-221ENST00000568549 CYP2D7A0A087X1C5 515 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 ZNF213O14771 459 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 CYP2D6P10635 497 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 MCCP23508 829 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 HAND2P61296 217 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 PPARAQ07869 468 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 IMMTQ16891 758 aaKnown RBP9.14□□□□□ -0.95
SCAPER-221ENST00000568549 C12orf60Q5U649 245 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 MAP1SQ66K74 1059 aaPredicted RBP9.14□□□□□ -0.95
SCAPER-221ENST00000568549 CDC37L1Q7L3B6 337 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 SH3BP5LQ7L8J4 393 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 TTC6Q86TZ1 520 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
SCAPER-221ENST00000568549 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms