RNA–Protein interactions for RNA: ENST00000568519.5

NEIL1-219, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 771 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-219ENST00000568519 NOL10Q9BSC4 688 aaKnown RBP17.19■□□□□ 0.34
NEIL1-219ENST00000568519 BCL11AQ9H165 835 aa17.19■□□□□ 0.34
NEIL1-219ENST00000568519 ZNF70Q9UC06 446 aaPredicted RBP17.19■□□□□ 0.34
NEIL1-219ENST00000568519 RPAP1Q9BWH6 1393 aaPredicted RBP17.18■□□□□ 0.34
NEIL1-219ENST00000568519 PDE6AP16499 860 aa17.18■□□□□ 0.34
NEIL1-219ENST00000568519 TNNI2P48788 182 aa17.18■□□□□ 0.34
NEIL1-219ENST00000568519 IDI2Q9BXS1 227 aa17.18■□□□□ 0.34
NEIL1-219ENST00000568519 NDUFB9Q9Y6M9 179 aa17.18■□□□□ 0.34
NEIL1-219ENST00000568519 COL2A1P02458 1487 aaPredicted RBP17.18■□□□□ 0.34
NEIL1-219ENST00000568519 TBC1D8O95759 1140 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 PDE4AP27815 886 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 ADD2P35612 726 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 BTDP43251 543 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 SLC9C2Q5TAH2 1124 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 TSHZ3Q63HK5 1081 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 MAGEB6Q8N7X4 407 aa17.17■□□□□ 0.34
NEIL1-219ENST00000568519 TDRD3Q9H7E2 651 aaKnown RBP17.17■□□□□ 0.34
NEIL1-219ENST00000568519 TCRBV5S4A2TA0A5A2 114 aa17.16■□□□□ 0.34
NEIL1-219ENST00000568519 CYP7A1P22680 504 aa17.16■□□□□ 0.34
NEIL1-219ENST00000568519 CDC42EP5Q6NZY7 148 aa17.16■□□□□ 0.34
NEIL1-219ENST00000568519 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
NEIL1-219ENST00000568519 FOCADQ5VW36 1801 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 ENTPD3O75355 529 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 RHBDL3P58872 404 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 PRAMEF18Q5VWM3 479 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 ZNF296Q8WUU4 475 aaPredicted RBP17.15■□□□□ 0.34
NEIL1-219ENST00000568519 EDC3Q96F86 508 aaKnown RBP17.15■□□□□ 0.34
NEIL1-219ENST00000568519 USP40Q9NVE5 1235 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 MKI67P46013 3256 aaKnown RBP17.15■□□□□ 0.34
NEIL1-219ENST00000568519 ZNF532Q9HCE3 1301 aa17.15■□□□□ 0.34
NEIL1-219ENST00000568519 HOOK2Q96ED9 719 aa17.14■□□□□ 0.33
NEIL1-219ENST00000568519 DEFB129Q9H1M3 183 aa17.14■□□□□ 0.33
NEIL1-219ENST00000568519 R3HDMLQ9H3Y0 253 aa17.14■□□□□ 0.33
NEIL1-219ENST00000568519 HTTP42858 3142 aa17.14■□□□□ 0.33
NEIL1-219ENST00000568519 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 UBE2Q2LH0YL09 131 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
NEIL1-219ENST00000568519 FKBP1BP68106 108 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 MKRN3Q13064 507 aaKnown RBP17.13■□□□□ 0.33
NEIL1-219ENST00000568519 TTC22Q5TAA0 569 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 ADGRA1Q86SQ6 560 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 FAM151AQ8WW52 585 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 APPBP2Q92624 585 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 RIOK1Q9BRS2 568 aaKnown RBP17.13■□□□□ 0.33
NEIL1-219ENST00000568519 FSD1Q9BTV5 496 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 AK9Q5TCS8 1911 aa17.13■□□□□ 0.33
NEIL1-219ENST00000568519 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 WDHD1O75717 1129 aaPredicted RBP17.12■□□□□ 0.33
NEIL1-219ENST00000568519 NF2P35240 595 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 RASA3Q14644 834 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 SUPT20HL1Q3ZLR7 823 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
NEIL1-219ENST00000568519 TAOK2Q9UL54 1235 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 ATRNL1Q5VV63 1379 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 PAPPA2Q9BXP8 1791 aa17.12■□□□□ 0.33
NEIL1-219ENST00000568519 MAGEB6P1A0A0J9YX57 407 aa17.11■□□□□ 0.33
NEIL1-219ENST00000568519 UNCXA6NJT0 531 aa17.11■□□□□ 0.33
NEIL1-219ENST00000568519 HIP1O00291 1037 aa17.11■□□□□ 0.33
NEIL1-219ENST00000568519 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
NEIL1-219ENST00000568519 TEX11Q8IYF3 940 aa17.1■□□□□ 0.33
NEIL1-219ENST00000568519 TEPSINQ96N21 525 aa17.1■□□□□ 0.33
NEIL1-219ENST00000568519 CRNKL1Q9BZJ0 848 aaKnown RBP17.1■□□□□ 0.33
NEIL1-219ENST00000568519 FAM198AQ9UFP1 575 aa17.1■□□□□ 0.33
NEIL1-219ENST00000568519 TRIM6-TRIM34B2RNG4 842 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 RGS3P49796 1198 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 NFIAQ12857 509 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 SH3RF3Q8TEJ3 882 aaPredicted RBP17.09■□□□□ 0.33
NEIL1-219ENST00000568519 DHX36Q9H2U1 1008 aaKnown RBP17.09■□□□□ 0.33
NEIL1-219ENST00000568519 HELLSQ9NRZ9 838 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 CENPFP49454 3210 aa17.09■□□□□ 0.33
NEIL1-219ENST00000568519 DDX60LQ5H9U9 1706 aaKnown RBP17.08■□□□□ 0.32
NEIL1-219ENST00000568519 GSPT1P15170 499 aaKnown RBP17.08■□□□□ 0.32
NEIL1-219ENST00000568519 GNAT2P19087 354 aa17.08■□□□□ 0.32
NEIL1-219ENST00000568519 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
NEIL1-219ENST00000568519 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.32
NEIL1-219ENST00000568519 MIGA1Q8NAN2 632 aa17.08■□□□□ 0.32
NEIL1-219ENST00000568519 OSBPL5Q9H0X9 879 aaPredicted RBP17.08■□□□□ 0.32
NEIL1-219ENST00000568519 FLT1P17948 1338 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 GPR25O00155 361 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 CACNB3P54284 484 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 MAP3K10Q02779 954 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 GIMAP6Q6P9H5 292 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 TMEM39BQ9GZU3 492 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 DDX4Q9NQI0 724 aaKnown RBP17.07■□□□□ 0.32
NEIL1-219ENST00000568519 ATP8A2Q9NTI2 1148 aa17.07■□□□□ 0.32
NEIL1-219ENST00000568519 SSC5DA1L4H1 1573 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 PPP1R12BO60237 982 aaPredicted RBP17.06■□□□□ 0.32
NEIL1-219ENST00000568519 MBD4O95243 580 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 SDSP20132 328 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 DYNLL1P63167 89 aaKnown RBP17.06■□□□□ 0.32
NEIL1-219ENST00000568519 DCAF15Q66K64 600 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 OSBP2Q969R2 916 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
NEIL1-219ENST00000568519 FZD1Q9UP38 647 aa17.06■□□□□ 0.32
NEIL1-219ENST00000568519 POTEFA5A3E0 1075 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 TBC1D12O60347 775 aa17.05■□□□□ 0.32
NEIL1-219ENST00000568519 MFAP1P55081 439 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms