RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 MAP4K4O95819 1239 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-215ENST00000568477 RHBDL3P58872 404 aa17.69■□□□□ 0.42
CMTM3-215ENST00000568477 CRHR2Q13324 411 aa17.69■□□□□ 0.42
CMTM3-215ENST00000568477 PICALMQ13492 652 aa17.69■□□□□ 0.42
CMTM3-215ENST00000568477 PKN2Q16513 984 aaKnown RBP17.69■□□□□ 0.42
CMTM3-215ENST00000568477 HSP90AB4PQ58FF6 505 aa17.69■□□□□ 0.42
CMTM3-215ENST00000568477 EAF2Q96CJ1 260 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-215ENST00000568477 CCDC8Q9H0W5 538 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-215ENST00000568477 TLR7Q9NYK1 1049 aaKnown RBP17.69■□□□□ 0.42
CMTM3-215ENST00000568477 ATRNL1Q5VV63 1379 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 IRF6O14896 467 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 HMMRO75330 724 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 CETPP11597 493 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 PPATQ06203 517 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 SNAPC2Q13487 334 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 RPAP2Q8IXW5 612 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-215ENST00000568477 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-215ENST00000568477 NOL10Q9BSC4 688 aaKnown RBP17.68■□□□□ 0.42
CMTM3-215ENST00000568477 DDX4Q9NQI0 724 aaKnown RBP17.68■□□□□ 0.42
CMTM3-215ENST00000568477 ZBTB40Q9NUA8 1239 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 DOCK2Q92608 1830 aa17.68■□□□□ 0.42
CMTM3-215ENST00000568477 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
CMTM3-215ENST00000568477 NOL9Q5SY16 702 aaKnown RBP17.67■□□□□ 0.42
CMTM3-215ENST00000568477 NAA16Q6N069 864 aaPredicted RBP17.67■□□□□ 0.42
CMTM3-215ENST00000568477 SH3BP5LQ7L8J4 393 aa17.67■□□□□ 0.42
CMTM3-215ENST00000568477 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-215ENST00000568477 CYP2E1P05181 493 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-215ENST00000568477 ZAP70P43403 619 aa17.66■□□□□ 0.42
CMTM3-215ENST00000568477 TAF1CQ15572 869 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-215ENST00000568477 AACSQ86V21 672 aa17.66■□□□□ 0.42
CMTM3-215ENST00000568477 FAM43AQ8N2R8 423 aa17.66■□□□□ 0.42
CMTM3-215ENST00000568477 ZFYVE28Q9HCC9 887 aa17.66■□□□□ 0.42
CMTM3-215ENST00000568477 MAST2Q6P0Q8 1798 aa17.66■□□□□ 0.42
CMTM3-215ENST00000568477 IGSF3O75054 1194 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 BAG3O95817 575 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 PDE3AQ14432 1141 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 TEX11Q8IYF3 940 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 RHPN1Q8TCX5 695 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 ERO1AQ96HE7 468 aa17.65■□□□□ 0.42
CMTM3-215ENST00000568477 ZCCHC17Q9NP64 241 aaKnown RBP17.65■□□□□ 0.42
CMTM3-215ENST00000568477 PLCG2P16885 1265 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 MAP3K10Q02779 954 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 FBXO46Q6PJ61 603 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-215ENST00000568477 SCYL3Q8IZE3 742 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 KIF1BPQ96EK5 621 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 IL1RAPL2Q9NP60 686 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 PIH1D3Q9NQM4 214 aaKnown RBP17.64■□□□□ 0.41
CMTM3-215ENST00000568477 PICK1Q9NRD5 415 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 HPS5Q9UPZ3 1129 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 KCNH4Q9UQ05 1017 aa17.64■□□□□ 0.41
CMTM3-215ENST00000568477 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-215ENST00000568477 PHF20L1A8MW92 1017 aa17.63■□□□□ 0.41
CMTM3-215ENST00000568477 BTBD19C9JJ37 291 aa17.63■□□□□ 0.41
CMTM3-215ENST00000568477 SP3Q02447 781 aa17.63■□□□□ 0.41
CMTM3-215ENST00000568477 SIRT2Q8IXJ6 389 aa17.63■□□□□ 0.41
CMTM3-215ENST00000568477 SH3RF3Q8TEJ3 882 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-215ENST00000568477 OSBPL5Q9H0X9 879 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-215ENST00000568477 AATFQ9NY61 560 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM3-215ENST00000568477 TRIM17Q9Y577 477 aa17.63■□□□□ 0.41
CMTM3-215ENST00000568477 APBB1O00213 710 aa17.62■□□□□ 0.41
CMTM3-215ENST00000568477 IDH1O75874 414 aaKnown RBP17.62■□□□□ 0.41
CMTM3-215ENST00000568477 PPP4CP60510 307 aa17.62■□□□□ 0.41
CMTM3-215ENST00000568477 C20orf194Q5TEA3 1177 aa17.62■□□□□ 0.41
CMTM3-215ENST00000568477 CLASRPQ8N2M8 674 aaKnown RBP17.62■□□□□ 0.41
CMTM3-215ENST00000568477 CD99L2Q8TCZ2 262 aa17.62■□□□□ 0.41
CMTM3-215ENST00000568477 TBC1D12O60347 775 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 CTNND1O60716 968 aaKnown RBP17.61■□□□□ 0.41
CMTM3-215ENST00000568477 RAB11FIP3O75154 756 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 CYP7A1P22680 504 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 RGS19P49795 217 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 OTOP1Q7RTM1 612 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 ADGRA1Q86SQ6 560 aa17.61■□□□□ 0.41
CMTM3-215ENST00000568477 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.61■□□□□ 0.41
CMTM3-215ENST00000568477 CXCL11O14625 94 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 SLURP2P0DP57 97 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 PTPRAP18433 802 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 EFCC1Q9HA90 598 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 ZHX2Q9Y6X8 837 aa17.6■□□□□ 0.41
CMTM3-215ENST00000568477 FAM196BA6NMK8 535 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 TLR2O60603 784 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 IFIT2P09913 472 aaKnown RBP17.59■□□□□ 0.41
CMTM3-215ENST00000568477 MAP3K12Q12852 859 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 ARHGEF6Q15052 776 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 MAPKAPK5Q8IW41 473 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 DHX36Q9H2U1 1008 aaKnown RBP17.59■□□□□ 0.41
CMTM3-215ENST00000568477 NDUFB9Q9Y6M9 179 aa17.59■□□□□ 0.41
CMTM3-215ENST00000568477 MYO5AQ9Y4I1 1855 aaKnown RBP17.58■□□□□ 0.41
CMTM3-215ENST00000568477 PDHXO00330 501 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 SOX10P56693 466 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 MLLT1Q03111 559 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-215ENST00000568477 MOGSQ13724 837 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 TMED8Q6PL24 325 aaPredicted RBP17.58■□□□□ 0.4
CMTM3-215ENST00000568477 CERS3Q8IU89 383 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 MAGEB6Q8N7X4 407 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 TGFBRAP1Q8WUH2 860 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 BCL11AQ9H165 835 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 ANTXR1Q9H6X2 564 aa17.58■□□□□ 0.4
CMTM3-215ENST00000568477 HERC5Q9UII4 1024 aaKnown RBP17.58■□□□□ 0.4
CMTM3-215ENST00000568477 DOCK1Q14185 1865 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms