RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 PDGFDQ9GZP0 370 aaPredicted RBP9.76□□□□□ -0.85
SMG1-214ENST00000568038 ZNF652Q9Y2D9 606 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 HRH3Q9Y5N1 445 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 TUBGCP6Q96RT7 1819 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 ABCC4O15439 1325 aa9.76□□□□□ -0.85
SMG1-214ENST00000568038 PIK3CDO00329 1044 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 GYS1P13807 737 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 SOX11P35716 441 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 PDE3AQ14432 1141 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 TMEM132AQ24JP5 1023 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 CWF19L2Q2TBE0 894 aaKnown RBP9.75□□□□□ -0.85
SMG1-214ENST00000568038 C4orf17Q53FE4 359 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 BEND3Q5T5X7 828 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 TBC1D9BQ66K14 1250 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 MSL1Q68DK7 614 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 CLEC4GQ6UXB4 293 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 ITPRIPQ8IWB1 547 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
SMG1-214ENST00000568038 NIP7Q9Y221 180 aaKnown RBP eCLIP9.75□□□□□ -0.85
SMG1-214ENST00000568038 C4AP0C0L4 1744 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 FAM177BA6PVY3 158 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 RAD21O60216 631 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 IGKV5-2P06315 115 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 CCT4P50991 539 aaKnown RBP9.74□□□□□ -0.85
SMG1-214ENST00000568038 MARSP56192 900 aaKnown RBP9.74□□□□□ -0.85
SMG1-214ENST00000568038 MAP3K10Q02779 954 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 HSP90AB3PQ58FF7 597 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 INTS3Q68E01 1043 aaKnown RBP9.74□□□□□ -0.85
SMG1-214ENST00000568038 LINS1Q8NG48 757 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 RUBCNLQ9H714 662 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 SERTAD1Q9UHV2 236 aa9.74□□□□□ -0.85
SMG1-214ENST00000568038 ARFGEF2Q9Y6D5 1785 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 NEURL1BA8MQ27 555 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 ALDH1L1O75891 902 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 CELA2BP08218 269 aaPredicted RBP9.73□□□□□ -0.85
SMG1-214ENST00000568038 GDF10P55107 478 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 MVPQ14764 893 aaKnown RBP9.73□□□□□ -0.85
SMG1-214ENST00000568038 NFIXQ14938 502 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 ZNF34Q8IZ26 560 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 JARID2Q92833 1246 aaPredicted RBP9.73□□□□□ -0.85
SMG1-214ENST00000568038 CRBNQ96SW2 442 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 SETDB2Q96T68 719 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 ISCA1Q9BUE6 129 aa9.73□□□□□ -0.85
SMG1-214ENST00000568038 NUP98P52948 1817 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 A0A1B0GTH6 734 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 NEFLP07196 543 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 SKIP12755 728 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 MX2P20592 715 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 KCNMA1Q12791 1236 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 GCKRQ14397 625 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 SUSD4Q5VX71 490 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 NLGN1Q8N2Q7 840 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 CCDC191Q8NCU4 936 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 RHBDD1Q8TEB9 315 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 CWC25Q9NXE8 425 aaPredicted RBP9.72□□□□□ -0.85
SMG1-214ENST00000568038 UBN2Q6ZU65 1347 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 BCORQ6W2J9 1755 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 ATP10DQ9P241 1426 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 PXDNLA1KZ92 1463 aa9.72□□□□□ -0.85
SMG1-214ENST00000568038 SCN7AQ01118 1682 aa9.71□□□□□ -0.85
SMG1-214ENST00000568038 ARHGEF15O94989 841 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 ZBTB7AO95365 584 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 INHAP05111 366 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 MSX1P28360 303 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 TM4SF1P30408 202 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 SCNN1DP51172 638 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 TRIM28Q13263 835 aaKnown RBP9.71□□□□□ -0.86
SMG1-214ENST00000568038 PARP10Q53GL7 1025 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 PPP1R42Q7Z4L9 355 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 PGBD3Q8N328 593 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 EXOC6Q8TAG9 804 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 MEIS3Q99687 375 aa9.71□□□□□ -0.86
SMG1-214ENST00000568038 UTP14AQ9BVJ6 771 aaKnown RBP9.71□□□□□ -0.86
SMG1-214ENST00000568038 C9orf78Q9NZ63 289 aaPredicted RBP9.71□□□□□ -0.86
SMG1-214ENST00000568038 TRMT112Q9UI30 125 aaKnown RBP9.71□□□□□ -0.86
SMG1-214ENST00000568038 QSER1Q2KHR3 1735 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 GRM8O00222 908 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
SMG1-214ENST00000568038 NPHP1O15259 732 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 MMP10P09238 476 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 NBPF7P0C2Y1 421 aaPredicted RBP9.7□□□□□ -0.86
SMG1-214ENST00000568038 PLA2G4AP47712 749 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 UBE3BQ7Z3V4 1068 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 NBPF5PQ86XG9 351 aaPredicted RBP9.7□□□□□ -0.86
SMG1-214ENST00000568038 SYNE4Q8N205 404 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 FAM89AQ96GI7 184 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 USP44Q9H0E7 712 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 DDX19BQ9UMR2 479 aa9.7□□□□□ -0.86
SMG1-214ENST00000568038 POLRMTO00411 1230 aaKnown RBP9.69□□□□□ -0.86
SMG1-214ENST00000568038 SERPINB2P05120 415 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 PCCAP05165 728 aaPredicted RBP9.69□□□□□ -0.86
SMG1-214ENST00000568038 UBTFL1P0CB47 393 aaPredicted RBP9.69□□□□□ -0.86
SMG1-214ENST00000568038 AFDNP55196 1824 aaKnown RBP9.69□□□□□ -0.86
SMG1-214ENST00000568038 DDR1Q08345 913 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 ANKRD36CQ5JPF3 1778 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 TPTE2Q6XPS3 522 aa9.69□□□□□ -0.86
SMG1-214ENST00000568038 TMEM151AQ8N4L1 468 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms