RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 GJA5P36382 358 aa11.48□□□□□ -0.57
CDH13-210ENST00000567445 RFX5P48382 616 aaPredicted RBP11.48□□□□□ -0.57
CDH13-210ENST00000567445 OTUD7BQ6GQQ9 843 aa11.48□□□□□ -0.57
CDH13-210ENST00000567445 FBXO46Q6PJ61 603 aaPredicted RBP11.48□□□□□ -0.57
CDH13-210ENST00000567445 POTEEQ6S8J3 1075 aa11.48□□□□□ -0.57
CDH13-210ENST00000567445 MRIQ9BWK5 157 aa11.48□□□□□ -0.57
CDH13-210ENST00000567445 TMEM39BQ9GZU3 492 aa11.48□□□□□ -0.57
CDH13-210ENST00000567445 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
CDH13-210ENST00000567445 MFSD10Q14728 455 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 ZDHHC15Q96MV8 337 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 ELP3Q9H9T3 547 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 SUGT1Q9Y2Z0 365 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 MAST3O60307 1309 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 TNRC18O15417 2968 aaPredicted RBP11.47□□□□□ -0.57
CDH13-210ENST00000567445 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
CDH13-210ENST00000567445 TESPA1A2RU30 521 aaPredicted RBP11.46□□□□□ -0.57
CDH13-210ENST00000567445 UBTFL1P0CB47 393 aaPredicted RBP11.46□□□□□ -0.57
CDH13-210ENST00000567445 SLC5A1P13866 664 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.46□□□□□ -0.57
CDH13-210ENST00000567445 ATG9AQ7Z3C6 839 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 LPIN2Q92539 896 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 OPTNQ96CV9 577 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 TMOD2Q9NZR1 351 aa11.46□□□□□ -0.57
CDH13-210ENST00000567445 ARHGAP33O14559 1287 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 CACNB3P54284 484 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 MAP3K9P80192 1104 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 FKBP1CQ5VVH2 108 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 HHIPL2Q6UWX4 724 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDH13-210ENST00000567445 WDR66Q8TBY9 1149 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
CDH13-210ENST00000567445 NOB1Q9ULX3 412 aaKnown RBP11.45□□□□□ -0.58
CDH13-210ENST00000567445 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 CSADQ9Y600 493 aa11.45□□□□□ -0.58
CDH13-210ENST00000567445 CIAO1O76071 339 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 CRHR2Q13324 411 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 VGLL4Q14135 290 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 APOBEC3HQ6NTF7 200 aaKnown RBP11.44□□□□□ -0.58
CDH13-210ENST00000567445 FAM83AQ86UY5 434 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 PTPN18Q99952 460 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 API5Q9BZZ5 524 aaKnown RBP11.44□□□□□ -0.58
CDH13-210ENST00000567445 SIL1Q9H173 461 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 GTF2A2P52657 109 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 ATP2B3Q16720 1220 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 HOOK2Q96ED9 719 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 ERO1AQ96HE7 468 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 TRIM17Q9Y577 477 aa11.44□□□□□ -0.58
CDH13-210ENST00000567445 HTTP42858 3142 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 MYH13Q9UKX3 1938 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 CCER2I3L3R5 266 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 OTOP1Q7RTM1 612 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 KCNV2Q8TDN2 545 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 BRI3BPQ8WY22 251 aa11.43□□□□□ -0.58
CDH13-210ENST00000567445 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
CDH13-210ENST00000567445 LRRFIP2Q9Y608 721 aaKnown RBP11.43□□□□□ -0.58
CDH13-210ENST00000567445 RPAP1Q9BWH6 1393 aaPredicted RBP11.42□□□□□ -0.58
CDH13-210ENST00000567445 CCL15-CCL14A0A0B4J2E2 113 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 SPDYE5A6NIY4 337 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 IL15P40933 162 aaPredicted RBP11.42□□□□□ -0.58
CDH13-210ENST00000567445 SP3Q02447 781 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 CCL15Q16663 113 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 DCAF15Q66K64 600 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 CD99L2Q8TCZ2 262 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 WRNIP1Q96S55 665 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 SNCAIPQ9Y6H5 919 aa11.42□□□□□ -0.58
CDH13-210ENST00000567445 SEMA3EO15041 775 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 RARSP54136 660 aaKnown RBP11.41□□□□□ -0.58
CDH13-210ENST00000567445 ERO1BQ86YB8 467 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 ARHGAP45Q92619 1136 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 ZKSCAN4Q969J2 545 aaPredicted RBP11.41□□□□□ -0.58
CDH13-210ENST00000567445 MEIS3Q99687 375 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 DENND2AQ9ULE3 1009 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
CDH13-210ENST00000567445 DAGLAQ9Y4D2 1042 aa11.41□□□□□ -0.58
CDH13-210ENST00000567445 CENPFP49454 3210 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 SALL1Q9NSC2 1324 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 LDHBP07195 334 aaKnown RBP11.4□□□□□ -0.58
CDH13-210ENST00000567445 CETPP11597 493 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 PRDX5P30044 214 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 TAF1CQ15572 869 aaPredicted RBP11.4□□□□□ -0.58
CDH13-210ENST00000567445 DIXDC1Q155Q3 683 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 INTS3Q68E01 1043 aaKnown RBP11.4□□□□□ -0.58
CDH13-210ENST00000567445 CDC42EP5Q6NZY7 148 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 FAM43AQ8N2R8 423 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 FAM151AQ8WW52 585 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 ZNF341Q9BYN7 854 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 EFCC1Q9HA90 598 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 ZFYVE28Q9HCC9 887 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 PTPN22Q9Y2R2 807 aa11.4□□□□□ -0.58
CDH13-210ENST00000567445 IRF6O14896 467 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 GNAI3P08754 354 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 PHKA1P46020 1223 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 PPIL2Q13356 520 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 SNAPC2Q13487 334 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 MIGA2Q7L4E1 593 aa11.39□□□□□ -0.59
CDH13-210ENST00000567445 WDHD1O75717 1129 aaPredicted RBP11.38□□□□□ -0.59
CDH13-210ENST00000567445 ADORA1P30542 326 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms