RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 ECE1P42892 770 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 SLFNL1Q499Z3 407 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 MIGA2Q7L4E1 593 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 ZFPM1Q8IX07 1006 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 CSRNP1Q96S65 589 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 DDX4Q9NQI0 724 aaKnown RBP18.27■□□□□ 0.52
COMMD4-219ENST00000567399 FZD1Q9UP38 647 aa18.27■□□□□ 0.52
COMMD4-219ENST00000567399 MYO5AQ9Y4I1 1855 aaKnown RBP18.26■□□□□ 0.51
COMMD4-219ENST00000567399 TCRBV5S4A2TA0A5A2 114 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 RASSF10A6NK89 507 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 ZNF157P51786 506 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-219ENST00000567399 RGMBQ6NW40 437 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 CDAN1Q8IWY9 1227 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 TRIM34Q9BYJ4 488 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 OSBPL5Q9H0X9 879 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-219ENST00000567399 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 ARMT1Q9H993 441 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
COMMD4-219ENST00000567399 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
COMMD4-219ENST00000567399 MBD4O95243 580 aa18.25■□□□□ 0.51
COMMD4-219ENST00000567399 PDE4AP27815 886 aa18.25■□□□□ 0.51
COMMD4-219ENST00000567399 CYP4F22Q6NT55 531 aa18.25■□□□□ 0.51
COMMD4-219ENST00000567399 APPBP2Q92624 585 aa18.25■□□□□ 0.51
COMMD4-219ENST00000567399 RIOK1Q9BRS2 568 aaKnown RBP18.25■□□□□ 0.51
COMMD4-219ENST00000567399 PPP4R2Q9NY27 417 aa18.25■□□□□ 0.51
COMMD4-219ENST00000567399 SAP30BPQ9UHR5 308 aaKnown RBP18.25■□□□□ 0.51
COMMD4-219ENST00000567399 USP2O75604 605 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-219ENST00000567399 CHGBP05060 677 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 HLA-DOAP06340 250 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 LCORLQ8N3X6 602 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 CCDC102AQ96A19 550 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 SLC10A4Q96EP9 437 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 HHIPL1Q96JK4 782 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 CAPNS2Q96L46 248 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
COMMD4-219ENST00000567399 DHX36Q9H2U1 1008 aaKnown RBP18.24■□□□□ 0.51
COMMD4-219ENST00000567399 RPAP1Q9BWH6 1393 aaPredicted RBP18.24■□□□□ 0.51
COMMD4-219ENST00000567399 FLT1P17948 1338 aa18.23■□□□□ 0.51
COMMD4-219ENST00000567399 PAPPA2Q9BXP8 1791 aa18.23■□□□□ 0.51
COMMD4-219ENST00000567399 DDTLA6NHG4 134 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-219ENST00000567399 ANKRD13AQ8IZ07 590 aa18.23■□□□□ 0.51
COMMD4-219ENST00000567399 CRACR2BQ8N4Y2 399 aaPredicted RBP18.23■□□□□ 0.51
COMMD4-219ENST00000567399 PUS7LQ9H0K6 701 aaKnown RBP18.23■□□□□ 0.51
COMMD4-219ENST00000567399 CSADQ9Y600 493 aa18.23■□□□□ 0.51
COMMD4-219ENST00000567399 SLC4A4Q9Y6R1 1079 aa18.23■□□□□ 0.51
COMMD4-219ENST00000567399 WDR33Q9C0J8 1336 aaKnown RBP18.23■□□□□ 0.51
COMMD4-219ENST00000567399 AK9Q5TCS8 1911 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 POLR3DP05423 398 aaPredicted RBP18.22■□□□□ 0.51
COMMD4-219ENST00000567399 VEGFBP49765 207 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 MAP3K9P80192 1104 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 SLC4A8Q2Y0W8 1093 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 AMOTL1Q8IY63 956 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 WRNIP1Q96S55 665 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.22■□□□□ 0.51
COMMD4-219ENST00000567399 PI4KBQ9UBF8 816 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 PALD1Q9ULE6 856 aa18.22■□□□□ 0.51
COMMD4-219ENST00000567399 RFX7Q2KHR2 1363 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 APPP05067 770 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 MAP3K11Q16584 847 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 TTC6Q86TZ1 520 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 DNAJC5GQ8N7S2 189 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 SDR42E1Q8WUS8 393 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 OSBP2Q969R2 916 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 MCM9Q9NXL9 1143 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 SSC5DA1L4H1 1573 aa18.21■□□□□ 0.51
COMMD4-219ENST00000567399 UNCXA6NJT0 531 aa18.2■□□□□ 0.5
COMMD4-219ENST00000567399 LDLRAD1Q5T700 205 aa18.2■□□□□ 0.5
COMMD4-219ENST00000567399 TTC22Q5TAA0 569 aa18.2■□□□□ 0.5
COMMD4-219ENST00000567399 ATP8A2Q9NTI2 1148 aa18.2■□□□□ 0.5
COMMD4-219ENST00000567399 M0R2C6 588 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 GPAA1O43292 621 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 PRKAB2O43741 272 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 GNAT2P19087 354 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 ZMYM1Q5SVZ6 1142 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 FOXP4Q8IVH2 680 aaPredicted RBP18.19■□□□□ 0.5
COMMD4-219ENST00000567399 ELP3Q9H9T3 547 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 DIAPH3Q9NSV4 1193 aa18.19■□□□□ 0.5
COMMD4-219ENST00000567399 ATRNL1Q5VV63 1379 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 HIP1O00291 1037 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 AOC2O75106 756 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 SDSP20132 328 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 NOGQ13253 232 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 TICAM2Q86XR7 235 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 ZKSCAN4Q969J2 545 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 CLMNQ96JQ2 1002 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 STRBPQ96SI9 672 aaKnown RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 DCP1AQ9NPI6 582 aaPredicted RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 HELLSQ9NRZ9 838 aa18.18■□□□□ 0.5
COMMD4-219ENST00000567399 HERC5Q9UII4 1024 aaKnown RBP18.18■□□□□ 0.5
COMMD4-219ENST00000567399 TBC1D12O60347 775 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 VGLL4Q14135 290 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 RASAL3Q86YV0 1011 aa18.17■□□□□ 0.5
COMMD4-219ENST00000567399 NACAP1Q9BZK3 213 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms