RNA–Protein interactions for RNA: ENST00000567223.6

SMPD3-209, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 2

Gene SMPD3, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-209ENST00000567223 DBNDD2Q9BQY9 259 aa22.89■■□□□ 1.25
SMPD3-209ENST00000567223 CHMP4BQ9H444 224 aaKnown RBP22.89■■□□□ 1.25
SMPD3-209ENST00000567223 CCL15-CCL14A0A0B4J2E2 113 aa22.88■■□□□ 1.25
SMPD3-209ENST00000567223 CCL15Q16663 113 aa22.88■■□□□ 1.25
SMPD3-209ENST00000567223 HSP90AB4PQ58FF6 505 aa22.88■■□□□ 1.25
SMPD3-209ENST00000567223 TMED8Q6PL24 325 aaPredicted RBP22.88■■□□□ 1.25
SMPD3-209ENST00000567223 ZFPM1Q8IX07 1006 aa22.88■■□□□ 1.25
SMPD3-209ENST00000567223 RPAP2Q8IXW5 612 aaPredicted RBP22.88■■□□□ 1.25
SMPD3-209ENST00000567223 KCNH4Q9UQ05 1017 aa22.88■■□□□ 1.25
SMPD3-209ENST00000567223 PHF20L1A8MW92 1017 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 TBC1D12O60347 775 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 INPP5BP32019 993 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 TTC39AQ5SRH9 613 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 SH3BP5LQ7L8J4 393 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 ERO1AQ96HE7 468 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 DDX4Q9NQI0 724 aaKnown RBP22.87■■□□□ 1.25
SMPD3-209ENST00000567223 ZBTB40Q9NUA8 1239 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 DBNLQ9UJU6 430 aaKnown RBP22.87■■□□□ 1.25
SMPD3-209ENST00000567223 RCAN3Q9UKA8 241 aa22.87■■□□□ 1.25
SMPD3-209ENST00000567223 TBC1D9Q6ZT07 1266 aa22.86■■□□□ 1.25
SMPD3-209ENST00000567223 LRP2BPQ9P2M1 347 aa22.86■■□□□ 1.25
SMPD3-209ENST00000567223 HPS5Q9UPZ3 1129 aa22.86■■□□□ 1.25
SMPD3-209ENST00000567223 FAM43AQ8N2R8 423 aa22.85■■□□□ 1.25
SMPD3-209ENST00000567223 EAF2Q96CJ1 260 aaPredicted RBP22.85■■□□□ 1.25
SMPD3-209ENST00000567223 ZFYVE28Q9HCC9 887 aa22.85■■□□□ 1.25
SMPD3-209ENST00000567223 RAI14Q9P0K7 980 aa22.85■■□□□ 1.25
SMPD3-209ENST00000567223 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.85■■□□□ 1.25
SMPD3-209ENST00000567223 DDTLA6NHG4 134 aaPredicted RBP22.84■■□□□ 1.25
SMPD3-209ENST00000567223 CYP2E1P05181 493 aaPredicted RBP22.84■■□□□ 1.25
SMPD3-209ENST00000567223 PPP4CP60510 307 aa22.84■■□□□ 1.25
SMPD3-209ENST00000567223 SP3Q02447 781 aa22.84■■□□□ 1.25
SMPD3-209ENST00000567223 PDE3AQ14432 1141 aa22.84■■□□□ 1.25
SMPD3-209ENST00000567223 SCYL3Q8IZE3 742 aa22.84■■□□□ 1.25
SMPD3-209ENST00000567223 AK9Q5TCS8 1911 aa22.83■■□□□ 1.25
SMPD3-209ENST00000567223 PLCG2P16885 1265 aa22.83■■□□□ 1.25
SMPD3-209ENST00000567223 TAF1CQ15572 869 aaPredicted RBP22.83■■□□□ 1.25
SMPD3-209ENST00000567223 BTBD19C9JJ37 291 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 CXCL11O14625 94 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 TLR2O60603 784 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 CTNND1O60716 968 aaKnown RBP22.82■■□□□ 1.24
SMPD3-209ENST00000567223 HMMRO75330 724 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 BAG3O95817 575 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 OTOP1Q7RTM1 612 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 ANKRD23Q86SG2 305 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 CERS3Q8IU89 383 aa22.82■■□□□ 1.24
SMPD3-209ENST00000567223 OSBPL5Q9H0X9 879 aaPredicted RBP22.82■■□□□ 1.24
SMPD3-209ENST00000567223 NAA16Q6N069 864 aaPredicted RBP22.81■■□□□ 1.24
SMPD3-209ENST00000567223 ZSCAN29Q8IWY8 852 aaPredicted RBP22.81■■□□□ 1.24
SMPD3-209ENST00000567223 TLR7Q9NYK1 1049 aaKnown RBP22.81■■□□□ 1.24
SMPD3-209ENST00000567223 EXOC6BQ9Y2D4 811 aa22.81■■□□□ 1.24
SMPD3-209ENST00000567223 CENPFP49454 3210 aa22.81■■□□□ 1.24
SMPD3-209ENST00000567223 DOCK1Q14185 1865 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 ZAP70P43403 619 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 MLLT1Q03111 559 aaPredicted RBP22.8■■□□□ 1.24
SMPD3-209ENST00000567223 PICALMQ13492 652 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 MOGSQ13724 837 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 ARHGEF6Q15052 776 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 NOL10Q9BSC4 688 aaKnown RBP22.8■■□□□ 1.24
SMPD3-209ENST00000567223 DHX36Q9H2U1 1008 aaKnown RBP22.8■■□□□ 1.24
SMPD3-209ENST00000567223 COG6Q9Y2V7 657 aa22.8■■□□□ 1.24
SMPD3-209ENST00000567223 PTPRAP18433 802 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 SIRT2Q8IXJ6 389 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.79■■□□□ 1.24
SMPD3-209ENST00000567223 RHPN1Q8TCX5 695 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 KIF1BPQ96EK5 621 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 CCDC8Q9H0W5 538 aaPredicted RBP22.79■■□□□ 1.24
SMPD3-209ENST00000567223 SNRKQ9NRH2 765 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 HERC5Q9UII4 1024 aaKnown RBP22.79■■□□□ 1.24
SMPD3-209ENST00000567223 TRIM17Q9Y577 477 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 FOCADQ5VW36 1801 aa22.79■■□□□ 1.24
SMPD3-209ENST00000567223 TEX11Q8IYF3 940 aa22.78■■□□□ 1.24
SMPD3-209ENST00000567223 TBC1D2Q9BYX2 928 aa22.78■■□□□ 1.24
SMPD3-209ENST00000567223 PICK1Q9NRD5 415 aa22.78■■□□□ 1.24
SMPD3-209ENST00000567223 A0A0G2JLL6 359 aaPredicted RBP22.77■■□□□ 1.24
SMPD3-209ENST00000567223 RAB11FIP3O75154 756 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 GNRH1P01148 92 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 PRRT2Q7Z6L0 340 aaPredicted RBP22.77■■□□□ 1.24
SMPD3-209ENST00000567223 AACSQ86V21 672 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 METTL16Q86W50 562 aaKnown RBP22.77■■□□□ 1.24
SMPD3-209ENST00000567223 CD99L2Q8TCZ2 262 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.77■■□□□ 1.24
SMPD3-209ENST00000567223 EFCC1Q9HA90 598 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 PIH1D3Q9NQM4 214 aaKnown RBP22.77■■□□□ 1.24
SMPD3-209ENST00000567223 PTPN22Q9Y2R2 807 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 SLC45A1Q9Y2W3 748 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 AFG3L2Q9Y4W6 797 aa22.77■■□□□ 1.24
SMPD3-209ENST00000567223 PHIPQ8WWQ0 1821 aa22.76■■□□□ 1.23
SMPD3-209ENST00000567223 FASTKD5Q7L8L6 764 aaKnown RBP22.76■■□□□ 1.23
SMPD3-209ENST00000567223 ADGRA1Q86SQ6 560 aa22.76■■□□□ 1.23
SMPD3-209ENST00000567223 CLASRPQ8N2M8 674 aaKnown RBP22.76■■□□□ 1.23
SMPD3-209ENST00000567223 SH3RF3Q8TEJ3 882 aaPredicted RBP22.76■■□□□ 1.23
SMPD3-209ENST00000567223 AATFQ9NY61 560 aaKnown RBP eCLIP22.76■■□□□ 1.23
SMPD3-209ENST00000567223 PI4KBQ9UBF8 816 aa22.76■■□□□ 1.23
SMPD3-209ENST00000567223 ADGRA2Q96PE1 1338 aa22.76■■□□□ 1.23
SMPD3-209ENST00000567223 TNRC18O15417 2968 aaPredicted RBP22.76■■□□□ 1.23
SMPD3-209ENST00000567223 C17orf99Q6UX52 265 aa22.75■■□□□ 1.23
SMPD3-209ENST00000567223 ZHX2Q9Y6X8 837 aa22.75■■□□□ 1.23
SMPD3-209ENST00000567223 CDK5RAP2Q96SN8 1893 aa22.75■■□□□ 1.23
SMPD3-209ENST00000567223 PDHXO00330 501 aa22.74■■□□□ 1.23
SMPD3-209ENST00000567223 TTF1Q15361 905 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms