RNA–Protein interactions for RNA: ENST00000566811.5

RNF40-210, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-210ENST00000566811 BMP2KLQ5H9B9 411 aa24.42■■□□□ 1.5
RNF40-210ENST00000566811 RGS3P49796 1198 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 CACNB3P54284 484 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 NFIAQ12857 509 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 ZMYM1Q5SVZ6 1142 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 DHX36Q9H2U1 1008 aaKnown RBP24.41■■□□□ 1.5
RNF40-210ENST00000566811 HELLSQ9NRZ9 838 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 WBP1LQ9NX94 342 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 FAM198AQ9UFP1 575 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 LAMB1P07942 1786 aa24.41■■□□□ 1.5
RNF40-210ENST00000566811 FLT1P17948 1338 aa24.4■■□□□ 1.5
RNF40-210ENST00000566811 MBD4O95243 580 aa24.4■■□□□ 1.5
RNF40-210ENST00000566811 MFAP1P55081 439 aaKnown RBP24.4■■□□□ 1.5
RNF40-210ENST00000566811 DDRGK1Q96HY6 314 aa24.4■■□□□ 1.5
RNF40-210ENST00000566811 OSBPL5Q9H0X9 879 aaPredicted RBP24.4■■□□□ 1.5
RNF40-210ENST00000566811 TRAF5O00463 557 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 SDSP20132 328 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 DYNLL1P63167 89 aaKnown RBP24.39■■□□□ 1.49
RNF40-210ENST00000566811 PICALMQ13492 652 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 TEPSINQ96N21 525 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 DIAPH3Q9NSV4 1193 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 ATP8A2Q9NTI2 1148 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 TAOK2Q9UL54 1235 aa24.39■■□□□ 1.49
RNF40-210ENST00000566811 RASSF10A6NK89 507 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 CELF2O95319 508 aaKnown RBP24.38■■□□□ 1.49
RNF40-210ENST00000566811 USP5P45974 858 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 DCAF15Q66K64 600 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 LCORLQ8N3X6 602 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 TGFBRAP1Q8WUH2 860 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 OSBP2Q969R2 916 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 TMEM39BQ9GZU3 492 aa24.38■■□□□ 1.49
RNF40-210ENST00000566811 PUS7LQ9H0K6 701 aaKnown RBP24.38■■□□□ 1.49
RNF40-210ENST00000566811 SSC5DA1L4H1 1573 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 UNCXA6NJT0 531 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 GPAA1O43292 621 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 PPP1R12BO60237 982 aaPredicted RBP24.37■■□□□ 1.49
RNF40-210ENST00000566811 LBX1P52954 281 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 DEFB115Q30KQ5 88 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 GIMAP6Q6P9H5 292 aa24.37■■□□□ 1.49
RNF40-210ENST00000566811 DDX4Q9NQI0 724 aaKnown RBP24.37■■□□□ 1.49
RNF40-210ENST00000566811 BAZ2AQ9UIF9 1905 aaKnown RBP24.37■■□□□ 1.49
RNF40-210ENST00000566811 RAD50Q92878 1312 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 TCP10Q12799 353 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 MCMDC2Q4G0Z9 681 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 C2orf69Q8N8R5 385 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 ARMT1Q9H993 441 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 OTOFQ9HC10 1997 aa24.36■■□□□ 1.49
RNF40-210ENST00000566811 SIPA1L1O43166 1804 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 ZSCAN29Q8IWY8 852 aaPredicted RBP24.35■■□□□ 1.49
RNF40-210ENST00000566811 AMOTL1Q8IY63 956 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 RUFY2Q8WXA3 655 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 CSRNP1Q96S65 589 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 STRBPQ96SI9 672 aaKnown RBP24.35■■□□□ 1.49
RNF40-210ENST00000566811 ZNF408Q9H9D4 720 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 GBA2Q9HCG7 927 aaPredicted RBP24.35■■□□□ 1.49
RNF40-210ENST00000566811 MYH8P13535 1937 aa24.35■■□□□ 1.49
RNF40-210ENST00000566811 HLA-DOAP06340 250 aa24.34■■□□□ 1.49
RNF40-210ENST00000566811 NBPF12Q5TAG4 269 aaPredicted RBP24.34■■□□□ 1.49
RNF40-210ENST00000566811 ARMC9Q7Z3E5 817 aa24.34■■□□□ 1.49
RNF40-210ENST00000566811 MAPKAPK5Q8IW41 473 aa24.34■■□□□ 1.49
RNF40-210ENST00000566811 SCAF8Q9UPN6 1271 aaKnown RBP24.34■■□□□ 1.49
RNF40-210ENST00000566811 CHGBP05060 677 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 HSPA8P11142 646 aaKnown RBP24.33■■□□□ 1.49
RNF40-210ENST00000566811 FMR1Q06787 632 aaKnown RBP eCLIP24.33■■□□□ 1.492e-6■■■■□ 22.7
RNF40-210ENST00000566811 MAP3K11Q16584 847 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 CST9Q5W186 159 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 HHIPL1Q96JK4 782 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 NACAP1Q9BZK3 213 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 PI4KBQ9UBF8 816 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 HERC5Q9UII4 1024 aaKnown RBP24.33■■□□□ 1.49
RNF40-210ENST00000566811 SLC4A4Q9Y6R1 1079 aa24.33■■□□□ 1.49
RNF40-210ENST00000566811 WDR33Q9C0J8 1336 aaKnown RBP24.33■■□□□ 1.48
RNF40-210ENST00000566811 M0R2C6 588 aa24.32■■□□□ 1.48
RNF40-210ENST00000566811 TBC1D12O60347 775 aa24.32■■□□□ 1.48
RNF40-210ENST00000566811 IREB2P48200 963 aaKnown RBP24.32■■□□□ 1.48
RNF40-210ENST00000566811 NMIQ13287 307 aaPredicted RBP24.32■■□□□ 1.48
RNF40-210ENST00000566811 SLFNL1Q499Z3 407 aa24.32■■□□□ 1.48
RNF40-210ENST00000566811 TTC6Q86TZ1 520 aa24.32■■□□□ 1.48
RNF40-210ENST00000566811 DCP1AQ9NPI6 582 aaPredicted RBP24.32■■□□□ 1.48
RNF40-210ENST00000566811 ARPP21Q9UBL0 812 aaPredicted RBP24.32■■□□□ 1.48
RNF40-210ENST00000566811 CCDC171Q6TFL3 1326 aa24.32■■□□□ 1.48
RNF40-210ENST00000566811 A0A0D9SFI3 127 aa24.31■■□□□ 1.48
RNF40-210ENST00000566811 CASC1Q6TDU7 716 aa24.31■■□□□ 1.48
RNF40-210ENST00000566811 EHD4Q9H223 541 aa24.31■■□□□ 1.48
RNF40-210ENST00000566811 ABT1Q9ULW3 272 aaKnown RBP24.31■■□□□ 1.48
RNF40-210ENST00000566811 TLL2Q9Y6L7 1015 aa24.31■■□□□ 1.48
RNF40-210ENST00000566811 ZMYM6O95789 1325 aa24.31■■□□□ 1.48
RNF40-210ENST00000566811 DOCK1Q14185 1865 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 PRAMEF18Q5VWM3 479 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 SDR42E1Q8WUS8 393 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 FAM227BQ96M60 508 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 ZNF341Q9BYN7 854 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 LAMA4Q16363 1823 aa24.3■■□□□ 1.48
RNF40-210ENST00000566811 ATAD5Q96QE3 1844 aa24.29■■□□□ 1.48
RNF40-210ENST00000566811 DDTLA6NHG4 134 aaPredicted RBP24.29■■□□□ 1.48
RNF40-210ENST00000566811 PATL2C9JE40 543 aaKnown RBP24.29■■□□□ 1.48
RNF40-210ENST00000566811 MAP3K10Q02779 954 aa24.29■■□□□ 1.48
RNF40-210ENST00000566811 TTLL12Q14166 644 aaPredicted RBP24.29■■□□□ 1.48
RNF40-210ENST00000566811 SH3BP5LQ7L8J4 393 aa24.29■■□□□ 1.48
RNF40-210ENST00000566811 SAPCD2Q86UD0 394 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms