RNA–Protein interactions for RNA: ENST00000566655.1

VAC14-208, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 5

Gene VAC14, Length 1,391 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-208ENST00000566655 PLCG2P16885 1265 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 APOBRQ0VD83 1088 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 TRDNQ13061 729 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 RAB3GAP1Q15042 981 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 MFSD6Q6ZSS7 791 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 TGFBRAP1Q8WUH2 860 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 ZSWIM5Q9P217 1185 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 ARPP21Q9UBL0 812 aaPredicted RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 PPP1R1BQ9UD71 204 aaPredicted RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 SH2B2O14492 632 aaPredicted RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 USP17L8P0C7I0 530 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 HDLBPQ00341 1268 aaKnown RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 C12orf60Q5U649 245 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 TEX11Q8IYF3 940 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 ZNF274Q96GC6 653 aaPredicted RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 GMLQ99445 158 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 NOL10Q9BSC4 688 aaKnown RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 KRT23Q9C075 422 aa18.68■□□□□ 0.58
VAC14-208ENST00000566655 RNF41Q9H4P4 317 aaPredicted RBP18.68■□□□□ 0.58
VAC14-208ENST00000566655 BRCA1P38398 1863 aaKnown RBP18.67■□□□□ 0.58
VAC14-208ENST00000566655 CCDC88AQ3V6T2 1871 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 ROBO3Q96MS0 1386 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
VAC14-208ENST00000566655 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
VAC14-208ENST00000566655 PDIA3P30101 505 aaKnown RBP18.67■□□□□ 0.58
VAC14-208ENST00000566655 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
VAC14-208ENST00000566655 SCNN1DP51172 638 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 LARGE2Q8N3Y3 721 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 GTF3C6Q969F1 213 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 ZDHHC15Q96MV8 337 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 SPON1Q9HCB6 807 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 BRPF3Q9ULD4 1205 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
VAC14-208ENST00000566655 SCN9AQ15858 1988 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 FLT1P17948 1338 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 ORC4O43929 436 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 KDM4AO75164 1064 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 USP5P45974 858 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 CRKP46108 304 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 SCRN1Q12765 414 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 PKP1Q13835 747 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 KIAA0825Q8IV33 1275 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 MAPKAPK5Q8IW41 473 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 TEKT1Q969V4 418 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 TMEM87BQ96K49 555 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 MTA3Q9BTC8 594 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 SENP2Q9HC62 589 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 MCM9Q9NXL9 1143 aa18.66■□□□□ 0.58
VAC14-208ENST00000566655 LTBP3Q9NS15 1303 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 WDHD1O75717 1129 aaPredicted RBP18.65■□□□□ 0.58
VAC14-208ENST00000566655 PRELPP51888 382 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 CDC42EP5Q6NZY7 148 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 RSBN1LQ6PCB5 846 aaPredicted RBP18.65■□□□□ 0.58
VAC14-208ENST00000566655 TAOK3Q9H2K8 898 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 LY9Q9HBG7 655 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 ZNRF3Q9ULT6 936 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 HPS5Q9UPZ3 1129 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.65■□□□□ 0.58
VAC14-208ENST00000566655 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
VAC14-208ENST00000566655 PSMD14O00487 310 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 STK3Q13188 491 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 STK11IPQ8N1F8 1099 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 KLHL34Q8N239 644 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 DDX4Q9NQI0 724 aaKnown RBP18.64■□□□□ 0.57
VAC14-208ENST00000566655 SERPINA10Q9UK55 444 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 ANGEL1Q9UNK9 670 aaKnown RBP18.64■□□□□ 0.57
VAC14-208ENST00000566655 BCS1LQ9Y276 419 aa18.64■□□□□ 0.57
VAC14-208ENST00000566655 DTNBO60941 627 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 CTDNEP1O95476 244 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 LIFRP42702 1097 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 PLCD1P51178 756 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 NUCB2P80303 420 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 FGD1P98174 961 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 SGMS1Q86VZ5 419 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 SMARCC2Q8TAQ2 1214 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 USP40Q9NVE5 1235 aa18.63■□□□□ 0.57
VAC14-208ENST00000566655 DDX60LQ5H9U9 1706 aaKnown RBP18.63■□□□□ 0.57
VAC14-208ENST00000566655 GOLGB1Q14789 3259 aaKnown RBP18.62■□□□□ 0.57
VAC14-208ENST00000566655 PRDM1O75626 825 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 RAD17O75943 681 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 BRD1O95696 1058 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 SEC23AQ15436 765 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 RRP12Q5JTH9 1297 aaKnown RBP18.62■□□□□ 0.57
VAC14-208ENST00000566655 ESR2Q92731 530 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 TNPO1Q92973 898 aaKnown RBP18.62■□□□□ 0.57
VAC14-208ENST00000566655 SAP30BPQ9UHR5 308 aaKnown RBP18.62■□□□□ 0.57
VAC14-208ENST00000566655 SMC3Q9UQE7 1217 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 MYH2Q9UKX2 1941 aa18.62■□□□□ 0.57
VAC14-208ENST00000566655 MYO3BQ8WXR4 1341 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 KLF18A0A0U1RQI7 1052 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 GJB2P29033 226 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 NFKBIBQ15653 356 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 CLEC17AQ6ZS10 378 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 NIM1KQ8IY84 436 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 NSUN7Q8NE18 718 aaKnown RBP18.61■□□□□ 0.57
VAC14-208ENST00000566655 DYNLL2Q96FJ2 89 aa18.61■□□□□ 0.57
VAC14-208ENST00000566655 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
VAC14-208ENST00000566655 CXCL9Q07325 125 aa18.6■□□□□ 0.57
VAC14-208ENST00000566655 FER1L6Q2WGJ9 1857 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms