RNA–Protein interactions for RNA: ENST00000566637.5

CTU2-208, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 2

Gene CTU2, Length 1,619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-208ENST00000566637 USP17L21D6R901 530 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 IARSP41252 1262 aaKnown RBP24.29■■□□□ 1.48
CTU2-208ENST00000566637 SBK1Q52WX2 424 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 HHIPL2Q6UWX4 724 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 CCDC83Q8IWF9 413 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 NIM1KQ8IY84 436 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 AGXT2Q9BYV1 514 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 MCM9Q9NXL9 1143 aa24.29■■□□□ 1.48
CTU2-208ENST00000566637 PCP11498 1178 aaKnown RBP24.28■■□□□ 1.48
CTU2-208ENST00000566637 SCNN1DP51172 638 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 FBXL16Q8N461 479 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 TGFBRAP1Q8WUH2 860 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 YDJCA8MPS7 323 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 ANTXR2P58335 489 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 RRP12Q5JTH9 1297 aaKnown RBP24.28■■□□□ 1.48
CTU2-208ENST00000566637 CDK5RAP2Q96SN8 1893 aa24.28■■□□□ 1.48
CTU2-208ENST00000566637 HDLBPQ00341 1268 aaKnown RBP24.27■■□□□ 1.48
CTU2-208ENST00000566637 KIAA0825Q8IV33 1275 aa24.27■■□□□ 1.48
CTU2-208ENST00000566637 MRIQ9BWK5 157 aa24.27■■□□□ 1.48
CTU2-208ENST00000566637 MYO3BQ8WXR4 1341 aa24.27■■□□□ 1.48
CTU2-208ENST00000566637 CYP2D7A0A087X1C5 515 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 CRKP46108 304 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 RHBDL3P58872 404 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 APOBRQ0VD83 1088 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 CYB5R4Q7L1T6 521 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 STK11IPQ8N1F8 1099 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 TMEM87BQ96K49 555 aa24.26■■□□□ 1.47
CTU2-208ENST00000566637 KDM4AO75164 1064 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 MAPKAPK5Q8IW41 473 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 NECAB1Q8N987 351 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 NLGN2Q8NFZ4 835 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 INCENPQ9NQS7 918 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 MKRN1Q9UHC7 482 aaKnown RBP24.25■■□□□ 1.47
CTU2-208ENST00000566637 ZNRF3Q9ULT6 936 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 SMC3Q9UQE7 1217 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 ADAMTSL1Q8N6G6 1762 aa24.25■■□□□ 1.47
CTU2-208ENST00000566637 FOCADQ5VW36 1801 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 ARFGEF1Q9Y6D6 1849 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 STK3Q13188 491 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 ESR2Q92731 530 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 NAP1L2Q9ULW6 460 aaPredicted RBP24.24■■□□□ 1.47
CTU2-208ENST00000566637 TACC3Q9Y6A5 838 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 USP17L8P0C7I0 530 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 NUCB2P80303 420 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 CHMP4CQ96CF2 233 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 COL4A5P29400 1685 aa24.24■■□□□ 1.47
CTU2-208ENST00000566637 POLR3DP05423 398 aaPredicted RBP24.23■■□□□ 1.47
CTU2-208ENST00000566637 CYP2D6P10635 497 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 PDE4BQ07343 736 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 SART3Q15020 963 aaKnown RBP24.23■■□□□ 1.47
CTU2-208ENST00000566637 RSBN1LQ6PCB5 846 aaPredicted RBP24.23■■□□□ 1.47
CTU2-208ENST00000566637 JDP2Q8WYK2 163 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 GTF3C6Q969F1 213 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 ZNF274Q96GC6 653 aaPredicted RBP24.23■■□□□ 1.47
CTU2-208ENST00000566637 ZDHHC15Q96MV8 337 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 USP40Q9NVE5 1235 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 ANGEL1Q9UNK9 670 aaKnown RBP24.23■■□□□ 1.47
CTU2-208ENST00000566637 FLT1P17948 1338 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 LTBP3Q9NS15 1303 aa24.23■■□□□ 1.47
CTU2-208ENST00000566637 DDX60LQ5H9U9 1706 aaKnown RBP24.22■■□□□ 1.47
CTU2-208ENST00000566637 NFKBIEO00221 500 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 SH2B2O14492 632 aaPredicted RBP24.22■■□□□ 1.47
CTU2-208ENST00000566637 PFKFB2O60825 505 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 RAD17O75943 681 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 RBM5P52756 815 aaKnown RBP eCLIP24.22■■□□□ 1.47
CTU2-208ENST00000566637 C12orf60Q5U649 245 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 MTA3Q9BTC8 594 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 ZSWIM5Q9P217 1185 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 SERPINA10Q9UK55 444 aa24.22■■□□□ 1.47
CTU2-208ENST00000566637 ERICH2A1L162 156 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 FGRP09769 529 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 ST3GAL1Q11201 340 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 TMEM67Q5HYA8 995 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 GPHNQ9NQX3 736 aaPredicted RBP24.21■■□□□ 1.47
CTU2-208ENST00000566637 SAP30BPQ9UHR5 308 aaKnown RBP24.21■■□□□ 1.47
CTU2-208ENST00000566637 ROBO3Q96MS0 1386 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 KLF18A0A0U1RQI7 1052 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 PSMD14O00487 310 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 IFIT3O14879 490 aaKnown RBP24.21■■□□□ 1.47
CTU2-208ENST00000566637 ORC4O43929 436 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 VIL1P09327 827 aaKnown RBP24.21■■□□□ 1.47
CTU2-208ENST00000566637 EVCP57679 992 aa24.21■■□□□ 1.47
CTU2-208ENST00000566637 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.21■■□□□ 1.47
CTU2-208ENST00000566637 MYH1P12882 1939 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 ECM29Q5VYK3 1845 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 NT5C2P49902 561 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 RAB3GAP1Q15042 981 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 APOBEC3HQ6NTF7 200 aaKnown RBP24.2■■□□□ 1.46
CTU2-208ENST00000566637 CDC42EP5Q6NZY7 148 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 UBAC1Q9BSL1 405 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 HDAC9Q9UKV0 1011 aa24.2■■□□□ 1.46
CTU2-208ENST00000566637 SMIM22K7EJ46 135 aa24.19■■□□□ 1.46
CTU2-208ENST00000566637 RANBP6O60518 1105 aaKnown RBP24.19■■□□□ 1.46
CTU2-208ENST00000566637 PDIA3P30101 505 aaKnown RBP24.19■■□□□ 1.46
CTU2-208ENST00000566637 SLC4A8Q2Y0W8 1093 aa24.19■■□□□ 1.46
CTU2-208ENST00000566637 NFXL1Q6ZNB6 911 aa24.19■■□□□ 1.46
CTU2-208ENST00000566637 NKX2-3Q8TAU0 364 aa24.19■■□□□ 1.46
CTU2-208ENST00000566637 GOLGA8BA8MQT2 603 aa24.18■■□□□ 1.46
CTU2-208ENST00000566637 PICALMQ13492 652 aa24.18■■□□□ 1.46
CTU2-208ENST00000566637 IGDCC4Q8TDY8 1250 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms