RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 CNKSR2Q8WXI2 1034 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 OTUD5Q96G74 571 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 ANTXR1Q9H6X2 564 aa23.54■■□□□ 1.36
CCDC113-204ENST00000566498 DDX4Q9NQI0 724 aaKnown RBP23.54■■□□□ 1.36
CCDC113-204ENST00000566498 CASP8AP2Q9UKL3 1982 aa23.53■■□□□ 1.36
CCDC113-204ENST00000566498 SMARCA5O60264 1052 aaPredicted RBP23.53■■□□□ 1.36
CCDC113-204ENST00000566498 IGSF3O75054 1194 aa23.53■■□□□ 1.36
CCDC113-204ENST00000566498 PLCG2P16885 1265 aa23.53■■□□□ 1.36
CCDC113-204ENST00000566498 MAP3K12Q12852 859 aa23.53■■□□□ 1.36
CCDC113-204ENST00000566498 SH3RF3Q8TEJ3 882 aaPredicted RBP23.53■■□□□ 1.36
CCDC113-204ENST00000566498 CRBNQ96SW2 442 aa23.53■■□□□ 1.36
CCDC113-204ENST00000566498 DDTLA6NHG4 134 aaPredicted RBP23.52■■□□□ 1.36
CCDC113-204ENST00000566498 INPP5BP32019 993 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 OTUD7BQ6GQQ9 843 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 SH3BP5LQ7L8J4 393 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 ERO1BQ86YB8 467 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 IFNL1Q8IU54 200 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 MAGEB6Q8N7X4 407 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 DNAJC2Q99543 621 aaKnown RBP23.52■■□□□ 1.36
CCDC113-204ENST00000566498 DCTPP1Q9H773 170 aa23.52■■□□□ 1.36
CCDC113-204ENST00000566498 MYO5AQ9Y4I1 1855 aaKnown RBP23.51■■□□□ 1.35
CCDC113-204ENST00000566498 ALDH1A1P00352 501 aa23.51■■□□□ 1.35
CCDC113-204ENST00000566498 PPP4CP60510 307 aa23.51■■□□□ 1.35
CCDC113-204ENST00000566498 TTF1Q15361 905 aaPredicted RBP23.51■■□□□ 1.35
CCDC113-204ENST00000566498 PCDHB15Q9Y5E8 787 aa23.51■■□□□ 1.35
CCDC113-204ENST00000566498 SNCAIPQ9Y6H5 919 aa23.51■■□□□ 1.35
CCDC113-204ENST00000566498 NPM3O75607 178 aaKnown RBP23.5■■□□□ 1.35
CCDC113-204ENST00000566498 GTF2A2P52657 109 aa23.5■■□□□ 1.35
CCDC113-204ENST00000566498 ADGRA1Q86SQ6 560 aa23.5■■□□□ 1.35
CCDC113-204ENST00000566498 ZNF112Q9UJU3 913 aa23.5■■□□□ 1.35
CCDC113-204ENST00000566498 OTOFQ9HC10 1997 aa23.5■■□□□ 1.35
CCDC113-204ENST00000566498 SPDYE5A6NIY4 337 aa23.49■■□□□ 1.35
CCDC113-204ENST00000566498 GOLIM4O00461 696 aa23.49■■□□□ 1.35
CCDC113-204ENST00000566498 CAPN15O75808 1086 aa23.49■■□□□ 1.35
CCDC113-204ENST00000566498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.49■■□□□ 1.35
CCDC113-204ENST00000566498 TGFBRAP1Q8WUH2 860 aa23.49■■□□□ 1.35
CCDC113-204ENST00000566498 BOLA2Q9H3K6 86 aa23.49■■□□□ 1.35
CCDC113-204ENST00000566498 MIGA1Q8NAN2 632 aa23.48■■□□□ 1.35
CCDC113-204ENST00000566498 MS4A4AQ96JQ5 239 aa23.48■■□□□ 1.35
CCDC113-204ENST00000566498 OSBPL5Q9H0X9 879 aaPredicted RBP23.48■■□□□ 1.35
CCDC113-204ENST00000566498 IGF2BP3O00425 579 aaKnown RBP eCLIP23.47■■□□□ 1.35
CCDC113-204ENST00000566498 ATP5JP18859 108 aa23.47■■□□□ 1.35
CCDC113-204ENST00000566498 DYNLL1P63167 89 aaKnown RBP23.47■■□□□ 1.35
CCDC113-204ENST00000566498 RFX7Q2KHR2 1363 aa23.47■■□□□ 1.35
CCDC113-204ENST00000566498 CCL15-CCL14A0A0B4J2E2 113 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 TESPA1A2RU30 521 aaPredicted RBP23.46■■□□□ 1.35
CCDC113-204ENST00000566498 PHF20L1A8MW92 1017 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 IRF6O14896 467 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 SLURP2P0DP57 97 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 MAP3K10Q02779 954 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 PPATQ06203 517 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 CCL15Q16663 113 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 SLC9C2Q5TAH2 1124 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 MAPKAPK5Q8IW41 473 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 PTPN18Q99952 460 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.46■■□□□ 1.35
CCDC113-204ENST00000566498 PICK1Q9NRD5 415 aa23.46■■□□□ 1.35
CCDC113-204ENST00000566498 GPR25O00155 361 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 PPIL2Q13356 520 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 SNAPC2Q13487 334 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 DGKZQ13574 1117 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 EDC3Q96F86 508 aaKnown RBP23.45■■□□□ 1.34
CCDC113-204ENST00000566498 R3HDMLQ9H3Y0 253 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 PAG1Q9NWQ8 432 aa23.45■■□□□ 1.34
CCDC113-204ENST00000566498 CETPP11597 493 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 USP5P45974 858 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 TMED8Q6PL24 325 aaPredicted RBP23.44■■□□□ 1.34
CCDC113-204ENST00000566498 CERS3Q8IU89 383 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 ZNF296Q8WUU4 475 aaPredicted RBP23.44■■□□□ 1.34
CCDC113-204ENST00000566498 BRI3BPQ8WY22 251 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 DHX36Q9H2U1 1008 aaKnown RBP23.44■■□□□ 1.34
CCDC113-204ENST00000566498 PI4KBQ9UBF8 816 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 MAST2Q6P0Q8 1798 aa23.44■■□□□ 1.34
CCDC113-204ENST00000566498 ATRNL1Q5VV63 1379 aa23.43■■□□□ 1.34
CCDC113-204ENST00000566498 DOCK2Q92608 1830 aa23.43■■□□□ 1.34
CCDC113-204ENST00000566498 TBC1D12O60347 775 aa23.43■■□□□ 1.34
CCDC113-204ENST00000566498 CTNND1O60716 968 aaKnown RBP23.43■■□□□ 1.34
CCDC113-204ENST00000566498 NOL9Q5SY16 702 aaKnown RBP23.43■■□□□ 1.34
CCDC113-204ENST00000566498 GPATCH3Q96I76 525 aa23.43■■□□□ 1.34
CCDC113-204ENST00000566498 HAUS7Q99871 368 aa23.43■■□□□ 1.34
CCDC113-204ENST00000566498 FAM196BA6NMK8 535 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 PDE6AP16499 860 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 SCYL3Q8IZE3 742 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 CFHR5Q9BXR6 569 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 ECHDC1Q9NTX5 307 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 ZBTB47Q9UFB7 747 aaPredicted RBP23.42■■□□□ 1.34
CCDC113-204ENST00000566498 SAP30BPQ9UHR5 308 aaKnown RBP23.42■■□□□ 1.34
CCDC113-204ENST00000566498 PALD1Q9ULE6 856 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 ZHX2Q9Y6X8 837 aa23.42■■□□□ 1.34
CCDC113-204ENST00000566498 FLT1P17948 1338 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 MAGEB6P1A0A0J9YX57 407 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 FKTNO75072 461 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 CRHR2Q13324 411 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 TRIM34Q9BYJ4 488 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.41■■□□□ 1.34
CCDC113-204ENST00000566498 MCOLN1Q9GZU1 580 aa23.41■■□□□ 1.34
CCDC113-204ENST00000566498 ZNF532Q9HCE3 1301 aa23.4■■□□□ 1.34
CCDC113-204ENST00000566498 CRACR2BQ8N4Y2 399 aaPredicted RBP23.4■■□□□ 1.34
CCDC113-204ENST00000566498 SUPT16HQ9Y5B9 1047 aaKnown RBP23.4■■□□□ 1.34
CCDC113-204ENST00000566498 PTPRAP18433 802 aa23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms