RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 EPB41L4AQ9HCS5 686 aaPredicted RBP9.85□□□□□ -0.83
CDH13-208ENST00000566333 USP40Q9NVE5 1235 aa9.85□□□□□ -0.83
CDH13-208ENST00000566333 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
CDH13-208ENST00000566333 GPAA1O43292 621 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 PLCG2P16885 1265 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 RASA3Q14644 834 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 CCDC129Q6ZRS4 1044 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 SH3BP5LQ7L8J4 393 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 FAM83AQ86UY5 434 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 CERS3Q8IU89 383 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 SULF1Q8IWU6 871 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 ZFPM1Q8IX07 1006 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 TEX11Q8IYF3 940 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 SMC1BQ8NDV3 1235 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 DCPSQ96C86 337 aaKnown RBP9.84□□□□□ -0.83
CDH13-208ENST00000566333 CDCA5Q96FF9 252 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 STRBPQ96SI9 672 aaKnown RBP9.84□□□□□ -0.83
CDH13-208ENST00000566333 OSBPL5Q9H0X9 879 aaPredicted RBP9.84□□□□□ -0.83
CDH13-208ENST00000566333 DEFB129Q9H1M3 183 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 TMOD2Q9NZR1 351 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 CLEC11AQ9Y240 323 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 PPP2R3BQ9Y5P8 575 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 THSD7BQ9C0I4 1608 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 PCNTO95613 3336 aa9.84□□□□□ -0.83
CDH13-208ENST00000566333 PRKAB2O43741 272 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 ENTPD3O75355 529 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 BAG3O95817 575 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 CHMLP26374 656 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 PICALMQ13492 652 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 TNFAIP1Q13829 316 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 LRRFIP1Q32MZ4 808 aaKnown RBP9.83□□□□□ -0.84
CDH13-208ENST00000566333 PRAMEF18Q5VWM3 479 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 CDC37L1Q7L3B6 337 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 USP48Q86UV5 1035 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 SDR42E1Q8WUS8 393 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 FAM151AQ8WW52 585 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 AIDAQ96BJ3 306 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 NOL10Q9BSC4 688 aaKnown RBP9.83□□□□□ -0.84
CDH13-208ENST00000566333 HELLSQ9NRZ9 838 aa9.83□□□□□ -0.84
CDH13-208ENST00000566333 CCDC171Q6TFL3 1326 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 RAD50Q92878 1312 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 DDTLA6NHG4 134 aaPredicted RBP9.82□□□□□ -0.84
CDH13-208ENST00000566333 GSG1L2A8MUP6 293 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 HIP1O00291 1037 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 EVX2Q03828 476 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 TCP10Q12799 353 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 FSTL1Q12841 308 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 VPS53Q5VIR6 699 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 CWC27Q6UX04 472 aaKnown RBP9.82□□□□□ -0.84
CDH13-208ENST00000566333 MAPKAPK5Q8IW41 473 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 TGFBRAP1Q8WUH2 860 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 CRNKL1Q9BZJ0 848 aaKnown RBP9.82□□□□□ -0.84
CDH13-208ENST00000566333 DCP1AQ9NPI6 582 aaPredicted RBP9.82□□□□□ -0.84
CDH13-208ENST00000566333 DIAPH3Q9NSV4 1193 aa9.82□□□□□ -0.84
CDH13-208ENST00000566333 ROBO3Q96MS0 1386 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 SMIM22K7EJ46 135 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 SGSM2O43147 1006 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 SLURP2P0DP57 97 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 TNNI2P48788 182 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 MCMDC2Q4G0Z9 681 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 NBPF12Q5TAG4 269 aaPredicted RBP9.81□□□□□ -0.84
CDH13-208ENST00000566333 DNAJC18Q9H819 358 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 SLC4A4Q9Y6R1 1079 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 MYH4Q9Y623 1939 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 ZMYM6O95789 1325 aa9.81□□□□□ -0.84
CDH13-208ENST00000566333 LOC285556D6RIA3 1793 aa9.8□□□□□ -0.84
CDH13-208ENST00000566333 CDC45O75419 566 aa9.8□□□□□ -0.84
CDH13-208ENST00000566333 CST9Q5W186 159 aa9.8□□□□□ -0.84
CDH13-208ENST00000566333 SAP30BPQ9UHR5 308 aaKnown RBP9.8□□□□□ -0.84
CDH13-208ENST00000566333 PALD1Q9ULE6 856 aa9.8□□□□□ -0.84
CDH13-208ENST00000566333 FZD1Q9UP38 647 aa9.8□□□□□ -0.84
CDH13-208ENST00000566333 CYP2D7A0A087X1C5 515 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 FAM196BA6NMK8 535 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 CELF2O95319 508 aaKnown RBP9.79□□□□□ -0.84
CDH13-208ENST00000566333 CYP2D6P10635 497 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 HSPD1P10809 573 aaKnown RBP9.79□□□□□ -0.84
CDH13-208ENST00000566333 GNAT2P19087 354 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 USP5P45974 858 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 SLC4A8Q2Y0W8 1093 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 MOB2Q70IA6 237 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 METTL16Q86W50 562 aaKnown RBP9.79□□□□□ -0.84
CDH13-208ENST00000566333 CSRNP1Q96S65 589 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 ESYT1Q9BSJ8 1104 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 ATP8A2Q9NTI2 1148 aa9.79□□□□□ -0.84
CDH13-208ENST00000566333 PARP14Q460N5 1801 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 PATL2C9JE40 543 aaKnown RBP9.78□□□□□ -0.84
CDH13-208ENST00000566333 PLCD1P51178 756 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 GABPAQ06546 454 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 GIMAP6Q6P9H5 292 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 CTR9Q6PD62 1173 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 IFNL3Q8IZI9 196 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 NBPF3Q9H094 633 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 EHD4Q9H223 541 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 DHX36Q9H2U1 1008 aaKnown RBP9.78□□□□□ -0.84
CDH13-208ENST00000566333 ZNF408Q9H9D4 720 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 MCM9Q9NXL9 1143 aa9.78□□□□□ -0.84
CDH13-208ENST00000566333 ARPP21Q9UBL0 812 aaPredicted RBP9.78□□□□□ -0.84
CDH13-208ENST00000566333 USP17L12C9JPN9 530 aa9.77□□□□□ -0.85
CDH13-208ENST00000566333 USP17L21D6R901 530 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms