RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GJB2P29033 226 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 TDO2P48775 406 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 CLCN6P51797 869 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 HAND2P61296 217 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 FGD1P98174 961 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 PPARAQ07869 468 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 DZIP1Q86YF9 867 aaKnown RBP10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 C2CD5Q86YS7 1000 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 TCEANC2Q96MN5 208 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 ARPP21Q9UBL0 812 aaPredicted RBP10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 ANGEL1Q9UNK9 670 aaKnown RBP10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 ATP6V1DQ9Y5K8 247 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 LAMB1P07942 1786 aa10.44□□□□□ -0.74
LSM3P5-201ENST00000566307 ROBO3Q96MS0 1386 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MROH7-TTC4A0A0A0MT08 1334 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 GPR75-ASB3A0A0A6YYF3 556 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 SH2B2O14492 632 aaPredicted RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 PRKAB2O43741 272 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 ORC4O43929 436 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 DHX16O60231 1041 aaKnown RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 ZSCAN22P10073 491 aaPredicted RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 PLCG2P16885 1265 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 PDIA3P30101 505 aaKnown RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 CHAF1AQ13111 956 aaPredicted RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 PKP1Q13835 747 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 DPP8Q6V1X1 898 aaPredicted RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 PODNQ7Z5L7 613 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 TMTC2Q8N394 836 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MIGA1Q8NAN2 632 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 C7orf43Q8WVR3 580 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MRIQ9BWK5 157 aa10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 ZC3H12CQ9C0D7 883 aaKnown RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 MKRN1Q9UHC7 482 aaKnown RBP10.43□□□□□ -0.74
LSM3P5-201ENST00000566307 NEDD4P46934 1319 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 F13A1P00488 732 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 SCRN1Q12765 414 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 PPP2R5BQ15173 497 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 MSL1Q68DK7 614 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 NECAB1Q8N987 351 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 TMEM87AQ8NBN3 555 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 NSUN7Q8NE18 718 aaKnown RBP10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 SUPT20HQ8NEM7 779 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 IGDCC4Q8TDY8 1250 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 VPS33BQ9H267 617 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 DCP1AQ9NPI6 582 aaPredicted RBP10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 MTMR6Q9Y217 621 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 STK24Q9Y6E0 443 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 SLX4Q8IY92 1834 aa10.42□□□□□ -0.74
LSM3P5-201ENST00000566307 EP400Q96L91 3159 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 MYH2Q9UKX2 1941 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 SLC3A2P08195 630 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 DYNLL1P63167 89 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 APOBRQ0VD83 1088 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 SART3Q15020 963 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 CTR9Q6PD62 1173 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 CYB5R4Q7L1T6 521 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 ESR2Q92731 530 aa10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 LARP6Q9BRS8 491 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 NOL10Q9BSC4 688 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 DDX60LQ5H9U9 1706 aaKnown RBP10.41□□□□□ -0.74
LSM3P5-201ENST00000566307 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 B4E1Z4 1266 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 TRAK2O60296 914 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 HDLBPQ00341 1268 aaKnown RBP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 KLHL40Q2TBA0 621 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 MFSD14BQ5SR56 506 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 LARP1BQ659C4 914 aaKnown RBP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 DEFB132Q7Z7B7 95 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 SLC51AQ86UW1 340 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 SDR42E1Q8WUS8 393 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 ZNF622Q969S3 477 aaKnown RBP eCLIP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 ZFP91Q96JP5 570 aaPredicted RBP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 LY9Q9HBG7 655 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 AATFQ9NY61 560 aaKnown RBP eCLIP10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 ZSWIM5Q9P217 1185 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
LSM3P5-201ENST00000566307 ZNF646O15015 1829 aaPredicted RBP10.4□□□□□ -0.75
LSM3P5-201ENST00000566307 FOCADQ5VW36 1801 aa10.4□□□□□ -0.75
LSM3P5-201ENST00000566307 BAZ2AQ9UIF9 1905 aaKnown RBP10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 NAV1Q8NEY1 1877 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 KLF18A0A0U1RQI7 1052 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 KDM4AO75164 1064 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CDKL5O76039 1030 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CTDNEP1O95476 244 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CTDSPL2Q05D32 466 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 KIAA2012Q0VF49 1180 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CCDC178Q5BJE1 867 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 SOGA3Q5TF21 947 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 C12orf60Q5U649 245 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 STRIP1Q5VSL9 837 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 APOA5Q6Q788 366 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms