RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 C9orf131Q5VYM1 1079 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-207ENST00000566095 ZNF384Q8TF68 577 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 HOOK2Q96ED9 719 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 JAKMIP1Q96N16 626 aaKnown RBP11.62□□□□□ -0.55
SF3B3-207ENST00000566095 NEK1Q96PY6 1258 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 ZSWIM6Q9HCJ5 1215 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 DCP1AQ9NPI6 582 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-207ENST00000566095 KCNQ5Q9NR82 932 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
SF3B3-207ENST00000566095 WDR19Q8NEZ3 1342 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 ERICH2A1L162 156 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 SPDYE2BA6NHP3 402 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 CHGBP05060 677 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 CYP21A2P08686 494 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 SPDYE6P0CI01 402 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 CASTP20810 708 aaKnown RBP11.61□□□□□ -0.55
SF3B3-207ENST00000566095 GMPSP49915 693 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-207ENST00000566095 ZNF280AP59817 542 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-207ENST00000566095 PPARAQ07869 468 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 AKNAD1Q5T1N1 836 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 CDC42EP5Q6NZY7 148 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 TGFBRAP1Q8WUH2 860 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 SDR42E1Q8WUS8 393 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 STAG1Q8WVM7 1258 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 ESR2Q92731 530 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 ZSCAN31Q96LW9 406 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-207ENST00000566095 MTA3Q9BTC8 594 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 MYOZ2Q9NPC6 264 aa11.61□□□□□ -0.55
SF3B3-207ENST00000566095 FLT1P17948 1338 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 COL2A1P02458 1487 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-207ENST00000566095 IQCA1LA6NCM1 817 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 MCM5P33992 734 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 DDIT3P35638 169 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 NEK4P51957 841 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 RHBDL3P58872 404 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 CUL4AQ13619 759 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 GRIK5Q16478 980 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 APOBEC3HQ6NTF7 200 aaKnown RBP11.6□□□□□ -0.55
SF3B3-207ENST00000566095 RUFY3Q7L099 469 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 POTEDQ86YR6 584 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 RGS22Q8NE09 1264 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 SH2B1Q9NRF2 756 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-207ENST00000566095 TOMM22Q9NS69 142 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 SWAP70Q9UH65 585 aa11.6□□□□□ -0.55
SF3B3-207ENST00000566095 CNOT7Q9UIV1 285 aaKnown RBP11.6□□□□□ -0.55
SF3B3-207ENST00000566095 COL4A5P29400 1685 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 USP17L12C9JPN9 530 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 USP17L21D6R901 530 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 E7EWF7 191 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 PRKAB2O43741 272 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 KIF4BQ2VIQ3 1234 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 SPDYE2Q495Y8 402 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 CTR9Q6PD62 1173 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 DHX32Q7L7V1 743 aaKnown RBP11.59□□□□□ -0.55
SF3B3-207ENST00000566095 FAM83AQ86UY5 434 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 IQCA1Q86XH1 822 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
SF3B3-207ENST00000566095 MAPKAPK5Q8IW41 473 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 ZSCAN29Q8IWY8 852 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-207ENST00000566095 TMTC2Q8N394 836 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 TTC14Q96N46 770 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 MKNK2Q9HBH9 465 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 EPB41L4AQ9HCS5 686 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-207ENST00000566095 PDRG1Q9NUG6 133 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 GPRC5DQ9NZD1 345 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 CHMP5Q9NZZ3 219 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 ZBTB12Q9Y330 459 aaPredicted RBP11.59□□□□□ -0.55
SF3B3-207ENST00000566095 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 SBF1O95248 1867 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 ZNF541Q9H0D2 1346 aa11.59□□□□□ -0.55
SF3B3-207ENST00000566095 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 ORC4O43929 436 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 HSP90AA1P07900 732 aaKnown RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 RPS6KB1P23443 525 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 HAND2P61296 217 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 PICALMQ13492 652 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 C12orf60Q5U649 245 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 CLEC17AQ6ZS10 378 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 CRACR2BQ8N4Y2 399 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 TMEM87BQ96K49 555 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 UBAC1Q9BSL1 405 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 OSBPL5Q9H0X9 879 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 EHD4Q9H223 541 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 ADARB2Q9NS39 739 aaKnown RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 PI4KBQ9UBF8 816 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 ZNF70Q9UC06 446 aaPredicted RBP11.58□□□□□ -0.56
SF3B3-207ENST00000566095 PPP2R3BQ9Y5P8 575 aa11.58□□□□□ -0.56
SF3B3-207ENST00000566095 LAMB1P07942 1786 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 NUCB2P80303 420 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
SF3B3-207ENST00000566095 FOXP4Q8IVH2 680 aaPredicted RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms