RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 PPP4R2Q9NY27 417 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 PI4KBQ9UBF8 816 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 ANGEL1Q9UNK9 670 aaKnown RBP15.17■□□□□ 0.02
SHCBP1-204ENST00000565887 MAST2Q6P0Q8 1798 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 TRIM6-TRIM34B2RNG4 842 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 TBC1D12O60347 775 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 GNAT2P19087 354 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 MAP3K10Q02779 954 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 LDLRAD1Q5T700 205 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 REM2Q8IYK8 340 aaPredicted RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 ANKRD13AQ8IZ07 590 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 MIGA1Q8NAN2 632 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 APPBP2Q92624 585 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 AIDAQ96BJ3 306 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 KLRG1Q96E93 195 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 CSRNP1Q96S65 589 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 ZNF341Q9BYN7 854 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 OSBPL5Q9H0X9 879 aaPredicted RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 ATP8A2Q9NTI2 1148 aa15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 MYO5AQ9Y4I1 1855 aaKnown RBP15.16■□□□□ 0.02
SHCBP1-204ENST00000565887 COL2A1P02458 1487 aaPredicted RBP15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 RFX7Q2KHR2 1363 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 ATRNL1Q5VV63 1379 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 UBE2Q2LH0YL09 131 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 HIP1O00291 1037 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 MAP2K2P36507 400 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 ZNF157P51786 506 aaPredicted RBP15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 DYNLL1P63167 89 aaKnown RBP15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 MAP3K9P80192 1104 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 SLC10A4Q96EP9 437 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 DDX4Q9NQI0 724 aaKnown RBP15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 HERC5Q9UII4 1024 aaKnown RBP15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 PAPPA2Q9BXP8 1791 aa15.15■□□□□ 0.02
SHCBP1-204ENST00000565887 AK9Q5TCS8 1911 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 HLA-DOAP06340 250 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 NOGQ13253 232 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 RILPL2Q969X0 211 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 CAPNS2Q96L46 248 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 MKRN1Q9UHC7 482 aaKnown RBP15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 CSADQ9Y600 493 aa15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 WDR33Q9C0J8 1336 aaKnown RBP15.14■□□□□ 0.01
SHCBP1-204ENST00000565887 HTRA3P83110 453 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 PRKG1Q13976 671 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 PAXIP1Q6ZW49 1069 aaPredicted RBP15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 MAPKAPK5Q8IW41 473 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 ZFPM1Q8IX07 1006 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 AMOTL1Q8IY63 956 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 ZNF112Q9UJU3 913 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 FLT1P17948 1338 aa15.13■□□□□ 0.01
SHCBP1-204ENST00000565887 DDTLA6NHG4 134 aaPredicted RBP15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 MBD4O95243 580 aa15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 VEGFBP49765 207 aa15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 MFAP1P55081 439 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 ZMYM1Q5SVZ6 1142 aa15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 METTL16Q86W50 562 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 STRBPQ96SI9 672 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 TRIM34Q9BYJ4 488 aa15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 PUS7LQ9H0K6 701 aaKnown RBP15.12■□□□□ 0.01
SHCBP1-204ENST00000565887 MYH7P12883 1935 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 CTNND1O60716 968 aaKnown RBP15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 POLR3DP05423 398 aaPredicted RBP15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 PDE4AP27815 886 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 INHBEP58166 350 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 TTC22Q5TAA0 569 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 MIGA2Q7L4E1 593 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 SH3BP5LQ7L8J4 393 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 LCORLQ8N3X6 602 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 JMYQ8N9B5 988 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 OSBP2Q969R2 916 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 WRNIP1Q96S55 665 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 NACAP1Q9BZK3 213 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 EHD4Q9H223 541 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 GINM1Q9NU53 330 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 SLC4A4Q9Y6R1 1079 aa15.11■□□□□ 0.01
SHCBP1-204ENST00000565887 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 SLC10A3P09131 477 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 ZBTB48P10074 688 aaPredicted RBP15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 MAP2K1Q02750 393 aaPredicted RBP15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 MCMDC2Q4G0Z9 681 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 MOB2Q70IA6 237 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 CDAN1Q8IWY9 1227 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 CRACR2BQ8N4Y2 399 aaPredicted RBP15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 DCP1AQ9NPI6 582 aaPredicted RBP15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 PALD1Q9ULE6 856 aa15.1■□□□□ 0.01
SHCBP1-204ENST00000565887 GPAA1O43292 621 aa15.09■□□□□ 0.01
SHCBP1-204ENST00000565887 SDSP20132 328 aa15.09■□□□□ 0.01
SHCBP1-204ENST00000565887 NOL9Q5SY16 702 aaKnown RBP15.09■□□□□ 0.01
SHCBP1-204ENST00000565887 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms