RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 DBNDD2Q9BQY9 259 aa20.45■□□□□ 0.86
USB1-211ENST00000565662 TBC1D2Q9BYX2 928 aa20.45■□□□□ 0.86
USB1-211ENST00000565662 SNCAIPQ9Y6H5 919 aa20.45■□□□□ 0.86
USB1-211ENST00000565662 TBC1D8O95759 1140 aa20.44■□□□□ 0.86
USB1-211ENST00000565662 NFIAQ12857 509 aa20.44■□□□□ 0.86
USB1-211ENST00000565662 TTF1Q15361 905 aaPredicted RBP20.44■□□□□ 0.86
USB1-211ENST00000565662 CDAN1Q8IWY9 1227 aa20.44■□□□□ 0.86
USB1-211ENST00000565662 ZFYVE28Q9HCC9 887 aa20.44■□□□□ 0.86
USB1-211ENST00000565662 COG6Q9Y2V7 657 aa20.44■□□□□ 0.86
USB1-211ENST00000565662 CCL15-CCL14A0A0B4J2E2 113 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 TBC1D12O60347 775 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 MAP3K10Q02779 954 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 CCL15Q16663 113 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 MS4A4AQ96JQ5 239 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 DHX36Q9H2U1 1008 aaKnown RBP20.43■□□□□ 0.86
USB1-211ENST00000565662 PICK1Q9NRD5 415 aa20.43■□□□□ 0.86
USB1-211ENST00000565662 DBNLQ9UJU6 430 aaKnown RBP20.43■□□□□ 0.86
USB1-211ENST00000565662 IGF2BP3O00425 579 aaKnown RBP eCLIP20.42■□□□□ 0.86
USB1-211ENST00000565662 GJA5P36382 358 aa20.42■□□□□ 0.86
USB1-211ENST00000565662 RHPN1Q8TCX5 695 aa20.42■□□□□ 0.86
USB1-211ENST00000565662 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.42■□□□□ 0.86
USB1-211ENST00000565662 EXOC6BQ9Y2D4 811 aa20.42■□□□□ 0.86
USB1-211ENST00000565662 DOCK1Q14185 1865 aa20.41■□□□□ 0.86
USB1-211ENST00000565662 RHBDL3P58872 404 aa20.41■□□□□ 0.86
USB1-211ENST00000565662 MAP3K12Q12852 859 aa20.41■□□□□ 0.86
USB1-211ENST00000565662 AACSQ86V21 672 aa20.41■□□□□ 0.86
USB1-211ENST00000565662 HERC5Q9UII4 1024 aaKnown RBP20.41■□□□□ 0.86
USB1-211ENST00000565662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.41■□□□□ 0.86
USB1-211ENST00000565662 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
USB1-211ENST00000565662 CXCL11O14625 94 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 CTNND1O60716 968 aaKnown RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 PPP4CP60510 307 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 PICALMQ13492 652 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 TAF1CQ15572 869 aaPredicted RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 FBXO46Q6PJ61 603 aaPredicted RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 PI16Q6UXB8 463 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 MIGA2Q7L4E1 593 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 TEX11Q8IYF3 940 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 SCYL3Q8IZE3 742 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 ZKSCAN4Q969J2 545 aaPredicted RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 EAF2Q96CJ1 260 aaPredicted RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.4■□□□□ 0.86
USB1-211ENST00000565662 KCNH4Q9UQ05 1017 aa20.4■□□□□ 0.86
USB1-211ENST00000565662 CCDC85CA6NKD9 419 aa20.39■□□□□ 0.85
USB1-211ENST00000565662 CYP2E1P05181 493 aaPredicted RBP20.39■□□□□ 0.85
USB1-211ENST00000565662 IFIT2P09913 472 aaKnown RBP20.39■□□□□ 0.85
USB1-211ENST00000565662 CRHR2Q13324 411 aa20.39■□□□□ 0.85
USB1-211ENST00000565662 BRI3BPQ8WY22 251 aa20.39■□□□□ 0.85
USB1-211ENST00000565662 OSBPL5Q9H0X9 879 aaPredicted RBP20.39■□□□□ 0.85
USB1-211ENST00000565662 IRF6O14896 467 aa20.38■□□□□ 0.85
USB1-211ENST00000565662 SP3Q02447 781 aa20.38■□□□□ 0.85
USB1-211ENST00000565662 TBC1D9Q6ZT07 1266 aa20.38■□□□□ 0.85
USB1-211ENST00000565662 FASTKD5Q7L8L6 764 aaKnown RBP20.38■□□□□ 0.85
USB1-211ENST00000565662 CCDC8Q9H0W5 538 aaPredicted RBP20.38■□□□□ 0.85
USB1-211ENST00000565662 GINM1Q9NU53 330 aa20.38■□□□□ 0.85
USB1-211ENST00000565662 GNRH1P01148 92 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 INPP5BP32019 993 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 ZAP70P43403 619 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 KIF22Q14807 665 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 ANKRD23Q86SG2 305 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 ZNF384Q8TF68 577 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 PI4KBQ9UBF8 816 aa20.37■□□□□ 0.85
USB1-211ENST00000565662 IDH1O75874 414 aaKnown RBP20.36■□□□□ 0.85
USB1-211ENST00000565662 HLA-DOAP06340 250 aa20.36■□□□□ 0.85
USB1-211ENST00000565662 PTPN18Q99952 460 aa20.36■□□□□ 0.85
USB1-211ENST00000565662 TRIM34Q9BYJ4 488 aa20.36■□□□□ 0.85
USB1-211ENST00000565662 DDX4Q9NQI0 724 aaKnown RBP20.36■□□□□ 0.85
USB1-211ENST00000565662 SNRKQ9NRH2 765 aa20.36■□□□□ 0.85
USB1-211ENST00000565662 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
USB1-211ENST00000565662 TLR2O60603 784 aa20.35■□□□□ 0.85
USB1-211ENST00000565662 PARK7Q99497 189 aaKnown RBP20.35■□□□□ 0.85
USB1-211ENST00000565662 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.35■□□□□ 0.85
USB1-211ENST00000565662 AATFQ9NY61 560 aaKnown RBP eCLIP20.35■□□□□ 0.85
USB1-211ENST00000565662 SLC45A1Q9Y2W3 748 aa20.35■□□□□ 0.85
USB1-211ENST00000565662 DDTLA6NHG4 134 aaPredicted RBP20.34■□□□□ 0.85
USB1-211ENST00000565662 PHF20L1A8MW92 1017 aa20.34■□□□□ 0.85
USB1-211ENST00000565662 RGS19P49795 217 aa20.34■□□□□ 0.85
USB1-211ENST00000565662 CNKSR2Q8WXI2 1034 aa20.34■□□□□ 0.85
USB1-211ENST00000565662 LRRCC1Q9C099 1032 aa20.34■□□□□ 0.85
USB1-211ENST00000565662 TLR7Q9NYK1 1049 aaKnown RBP20.34■□□□□ 0.85
USB1-211ENST00000565662 CDK5RAP2Q96SN8 1893 aa20.34■□□□□ 0.85
USB1-211ENST00000565662 PTPRAP18433 802 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 CYP7A1P22680 504 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 PRMT2P55345 433 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 SH3BP5LQ7L8J4 393 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 FOXP4Q8IVH2 680 aaPredicted RBP20.33■□□□□ 0.85
USB1-211ENST00000565662 ZFPM1Q8IX07 1006 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 GPATCH3Q96I76 525 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 EFCC1Q9HA90 598 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 AS3MTQ9HBK9 375 aa20.33■□□□□ 0.85
USB1-211ENST00000565662 ATAD5Q96QE3 1844 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 FLT1P17948 1338 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 BTBD19C9JJ37 291 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 FAM43AQ8N2R8 423 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 SH3RF3Q8TEJ3 882 aaPredicted RBP20.32■□□□□ 0.84
USB1-211ENST00000565662 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.32■□□□□ 0.84
USB1-211ENST00000565662 IL1RAPL2Q9NP60 686 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 HPS5Q9UPZ3 1129 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 TRIM17Q9Y577 477 aa20.32■□□□□ 0.84
USB1-211ENST00000565662 MYO5AQ9Y4I1 1855 aaKnown RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms