RNA–Protein interactions for RNA: ENST00000565210.5

CDH11-211, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-211ENST00000565210 TEX11Q8IYF3 940 aa27.33■■□□□ 1.97
CDH11-211ENST00000565210 PPP4CP60510 307 aa27.32■■□□□ 1.96
CDH11-211ENST00000565210 GTF2A2P52657 109 aa27.31■■□□□ 1.96
CDH11-211ENST00000565210 ZFPM1Q8IX07 1006 aa27.31■■□□□ 1.96
CDH11-211ENST00000565210 DCTPP1Q9H773 170 aa27.31■■□□□ 1.96
CDH11-211ENST00000565210 PIH1D3Q9NQM4 214 aaKnown RBP27.31■■□□□ 1.96
CDH11-211ENST00000565210 AATFQ9NY61 560 aaKnown RBP eCLIP27.31■■□□□ 1.96
CDH11-211ENST00000565210 AKAP11Q9UKA4 1901 aa27.31■■□□□ 1.96
CDH11-211ENST00000565210 CYP7A1P22680 504 aa27.3■■□□□ 1.96
CDH11-211ENST00000565210 IFNL1Q8IU54 200 aa27.3■■□□□ 1.96
CDH11-211ENST00000565210 ZNF112Q9UJU3 913 aa27.3■■□□□ 1.96
CDH11-211ENST00000565210 SPDYE5A6NIY4 337 aa27.29■■□□□ 1.96
CDH11-211ENST00000565210 ZKSCAN4Q969J2 545 aaPredicted RBP27.29■■□□□ 1.96
CDH11-211ENST00000565210 OTUD5Q96G74 571 aa27.29■■□□□ 1.96
CDH11-211ENST00000565210 DDX4Q9NQI0 724 aaKnown RBP27.29■■□□□ 1.96
CDH11-211ENST00000565210 RFX7Q2KHR2 1363 aa27.28■■□□□ 1.96
CDH11-211ENST00000565210 PPATQ06203 517 aa27.28■■□□□ 1.96
CDH11-211ENST00000565210 AAMPQ13685 434 aa27.28■■□□□ 1.96
CDH11-211ENST00000565210 CFHR5Q9BXR6 569 aa27.28■■□□□ 1.96
CDH11-211ENST00000565210 DHX36Q9H2U1 1008 aaKnown RBP27.28■■□□□ 1.96
CDH11-211ENST00000565210 SNCAIPQ9Y6H5 919 aa27.28■■□□□ 1.96
CDH11-211ENST00000565210 TESPA1A2RU30 521 aaPredicted RBP27.27■■□□□ 1.96
CDH11-211ENST00000565210 GJA5P36382 358 aa27.27■■□□□ 1.96
CDH11-211ENST00000565210 MAGEB6Q8N7X4 407 aa27.27■■□□□ 1.96
CDH11-211ENST00000565210 SH3RF3Q8TEJ3 882 aaPredicted RBP27.27■■□□□ 1.96
CDH11-211ENST00000565210 OSBPL5Q9H0X9 879 aaPredicted RBP27.27■■□□□ 1.96
CDH11-211ENST00000565210 AK9Q5TCS8 1911 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 DDTLA6NHG4 134 aaPredicted RBP27.26■■□□□ 1.95
CDH11-211ENST00000565210 TBC1D12O60347 775 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 TBC1D8O95759 1140 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 ATP5JP18859 108 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 INPP5BP32019 993 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 MAP3K10Q02779 954 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 NOM1Q5C9Z4 860 aaKnown RBP27.26■■□□□ 1.95
CDH11-211ENST00000565210 NOL9Q5SY16 702 aaKnown RBP27.26■■□□□ 1.95
CDH11-211ENST00000565210 GPATCH3Q96I76 525 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 DNAJC2Q99543 621 aaKnown RBP27.26■■□□□ 1.95
CDH11-211ENST00000565210 ANTXR1Q9H6X2 564 aa27.26■■□□□ 1.95
CDH11-211ENST00000565210 ZBTB47Q9UFB7 747 aaPredicted RBP27.26■■□□□ 1.95
CDH11-211ENST00000565210 ATRNL1Q5VV63 1379 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 CETPP11597 493 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 PPIL2Q13356 520 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 SNAPC2Q13487 334 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 SH3BP5LQ7L8J4 393 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 CRBNQ96SW2 442 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 PICK1Q9NRD5 415 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 NDUFB9Q9Y6M9 179 aa27.25■■□□□ 1.95
CDH11-211ENST00000565210 CCL15-CCL14A0A0B4J2E2 113 aa27.24■■□□□ 1.95
CDH11-211ENST00000565210 CCL15Q16663 113 aa27.24■■□□□ 1.95
CDH11-211ENST00000565210 TGFBRAP1Q8WUH2 860 aa27.24■■□□□ 1.95
CDH11-211ENST00000565210 BOLA2Q9H3K6 86 aa27.24■■□□□ 1.95
CDH11-211ENST00000565210 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.24■■□□□ 1.95
CDH11-211ENST00000565210 GOLIM4O00461 696 aa27.23■■□□□ 1.95
CDH11-211ENST00000565210 CTNND1O60716 968 aaKnown RBP27.23■■□□□ 1.95
CDH11-211ENST00000565210 CNKSR2Q8WXI2 1034 aa27.23■■□□□ 1.95
CDH11-211ENST00000565210 MS4A4AQ96JQ5 239 aa27.23■■□□□ 1.95
CDH11-211ENST00000565210 PI4KBQ9UBF8 816 aa27.23■■□□□ 1.95
CDH11-211ENST00000565210 PCDHB15Q9Y5E8 787 aa27.23■■□□□ 1.95
CDH11-211ENST00000565210 COL2A1P02458 1487 aaPredicted RBP27.22■■□□□ 1.95
CDH11-211ENST00000565210 GPR25O00155 361 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 SMARCA5O60264 1052 aaPredicted RBP27.22■■□□□ 1.95
CDH11-211ENST00000565210 SLC9C2Q5TAH2 1124 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 ADGRA1Q86SQ6 560 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 SCYL3Q8IZE3 742 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 TRIM34Q9BYJ4 488 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.22■■□□□ 1.95
CDH11-211ENST00000565210 PAG1Q9NWQ8 432 aa27.22■■□□□ 1.95
CDH11-211ENST00000565210 HERC5Q9UII4 1024 aaKnown RBP27.22■■□□□ 1.95
CDH11-211ENST00000565210 IGF2BP3O00425 579 aaKnown RBP eCLIP27.21■■□□□ 1.95
CDH11-211ENST00000565210 IRF6O14896 467 aa27.21■■□□□ 1.95
CDH11-211ENST00000565210 USP5P45974 858 aa27.21■■□□□ 1.95
CDH11-211ENST00000565210 HAUS7Q99871 368 aa27.21■■□□□ 1.95
CDH11-211ENST00000565210 ECHDC1Q9NTX5 307 aa27.21■■□□□ 1.95
CDH11-211ENST00000565210 PHF20L1A8MW92 1017 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 HLA-DOAP06340 250 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 DGKZQ13574 1117 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 FOXP4Q8IVH2 680 aaPredicted RBP27.2■■□□□ 1.94
CDH11-211ENST00000565210 MAPKAPK5Q8IW41 473 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 MIGA1Q8NAN2 632 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 ZCCHC17Q9NP64 241 aaKnown RBP27.2■■□□□ 1.94
CDH11-211ENST00000565210 MAST2Q6P0Q8 1798 aa27.2■■□□□ 1.94
CDH11-211ENST00000565210 FKTNO75072 461 aa27.19■■□□□ 1.94
CDH11-211ENST00000565210 ZSCAN25Q6NSZ9 544 aa27.19■■□□□ 1.94
CDH11-211ENST00000565210 BRI3BPQ8WY22 251 aa27.19■■□□□ 1.94
CDH11-211ENST00000565210 CXCL11O14625 94 aa27.18■■□□□ 1.94
CDH11-211ENST00000565210 DYNLL1P63167 89 aaKnown RBP27.18■■□□□ 1.94
CDH11-211ENST00000565210 ZNF296Q8WUU4 475 aaPredicted RBP27.18■■□□□ 1.94
CDH11-211ENST00000565210 PTPN18Q99952 460 aa27.18■■□□□ 1.94
CDH11-211ENST00000565210 ZFYVE28Q9HCC9 887 aa27.18■■□□□ 1.94
CDH11-211ENST00000565210 OTOFQ9HC10 1997 aa27.18■■□□□ 1.94
CDH11-211ENST00000565210 FLT1P17948 1338 aa27.17■■□□□ 1.94
CDH11-211ENST00000565210 MAGEB6P1A0A0J9YX57 407 aa27.17■■□□□ 1.94
CDH11-211ENST00000565210 PDE6AP16499 860 aa27.17■■□□□ 1.94
CDH11-211ENST00000565210 CTU1Q7Z7A3 348 aaKnown RBP27.17■■□□□ 1.94
CDH11-211ENST00000565210 CRACR2BQ8N4Y2 399 aaPredicted RBP27.17■■□□□ 1.94
CDH11-211ENST00000565210 KCNH4Q9UQ05 1017 aa27.17■■□□□ 1.94
CDH11-211ENST00000565210 TAF1CQ15572 869 aaPredicted RBP27.16■■□□□ 1.94
CDH11-211ENST00000565210 GCC1Q96CN9 775 aa27.16■■□□□ 1.94
CDH11-211ENST00000565210 TBC1D2Q9BYX2 928 aa27.16■■□□□ 1.94
CDH11-211ENST00000565210 ZHX2Q9Y6X8 837 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms